Reimplmentation of pyGaussDCA
Project description
GaussDCApy
Reimplementation of pyGaussDCA
Used output function from https://github.com/MMichel/GaussDCA.
New features
- add pyproject.toml
- add txt output (like GaussDCA.jl)
- use robust fasta parser instead of a3m parser
- add wheel files for Python 3.10-3.14
- split alignment according to coevolution score
Usage
pip install gaussdcapy
python3 -m gaussdcapy input.fasta
Compatibility
Currently only support Linux due to pythran compile failed in Windows.
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distributions
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file gaussdcapy-1.1.0.tar.gz.
File metadata
- Download URL: gaussdcapy-1.1.0.tar.gz
- Upload date:
- Size: 30.3 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.1.0 CPython/3.11.2
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
c9d3607ab2b0e9955b9ac356877d73cdd93b382cfff7231851826992facee3b6
|
|
| MD5 |
241af53e7f22a9bd13e2b448db6952b8
|
|
| BLAKE2b-256 |
88fb753414eab8ab5736aed627e2ebe2e94eb2dc61762ea246fb2857be8afdf2
|
File details
Details for the file gaussdcapy-1.1.0-cp314-cp314-manylinux_2_36_x86_64.whl.
File metadata
- Download URL: gaussdcapy-1.1.0-cp314-cp314-manylinux_2_36_x86_64.whl
- Upload date:
- Size: 108.3 kB
- Tags: CPython 3.14, manylinux: glibc 2.36+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.1.0 CPython/3.11.2
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
d5fd18d2170d937208dfd486cc28d0e5d449a76bd5310f86125f515b495c3280
|
|
| MD5 |
1fd9e8f378985ce44f7c067835c46f09
|
|
| BLAKE2b-256 |
0a4485eedc3b855d569dca5bf4e5cec4fff1d464aeaf93cfd5417e24812f0732
|
File details
Details for the file gaussdcapy-1.1.0-cp313-cp313-manylinux_2_36_x86_64.whl.
File metadata
- Download URL: gaussdcapy-1.1.0-cp313-cp313-manylinux_2_36_x86_64.whl
- Upload date:
- Size: 108.3 kB
- Tags: CPython 3.13, manylinux: glibc 2.36+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.1.0 CPython/3.11.2
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
433b56994d47f87d962c42603841a71c02a31b1f42362f8f67f50c58c0975a25
|
|
| MD5 |
e121a7375366caf10899f10f4d474e2f
|
|
| BLAKE2b-256 |
aba6f6c77a69189fd8ba4344c5bc8d1bf97b5c6d10bf47c6824c1dcdfc52950c
|
File details
Details for the file gaussdcapy-1.1.0-cp312-cp312-manylinux_2_36_x86_64.whl.
File metadata
- Download URL: gaussdcapy-1.1.0-cp312-cp312-manylinux_2_36_x86_64.whl
- Upload date:
- Size: 108.3 kB
- Tags: CPython 3.12, manylinux: glibc 2.36+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.1.0 CPython/3.11.2
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
1950d3d9f73b364663ce37c3a3ff60615869e80ab6e54130c7d7c12fe36e7747
|
|
| MD5 |
c02dc4358c721f36681d068b11c9adf0
|
|
| BLAKE2b-256 |
c4794933d95e7b29dcaad1ca355282dce3682ec88f9958e91f392dff5ef877e2
|
File details
Details for the file gaussdcapy-1.1.0-cp311-cp311-manylinux_2_36_x86_64.whl.
File metadata
- Download URL: gaussdcapy-1.1.0-cp311-cp311-manylinux_2_36_x86_64.whl
- Upload date:
- Size: 110.3 kB
- Tags: CPython 3.11, manylinux: glibc 2.36+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.1.0 CPython/3.11.2
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
7fd54c56e1b3fd6968279014a0c262986957df7099cd89249cf711b766722fb8
|
|
| MD5 |
3df841c0cc00a60827fb21c572a65c96
|
|
| BLAKE2b-256 |
dc1f1de3ea9560e151c7501b7cce4194c8e08564be5e35091dbc2692c91c509d
|
File details
Details for the file gaussdcapy-1.1.0-cp310-cp310-manylinux_2_36_x86_64.whl.
File metadata
- Download URL: gaussdcapy-1.1.0-cp310-cp310-manylinux_2_36_x86_64.whl
- Upload date:
- Size: 108.8 kB
- Tags: CPython 3.10, manylinux: glibc 2.36+ x86-64
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.1.0 CPython/3.11.2
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
a9edb28a269d7b40c981fcee23186b2acfb0eda0ae60eb4c7d5d7f932c8cbf9a
|
|
| MD5 |
43427269eda3010c1efab68180f6d94d
|
|
| BLAKE2b-256 |
2985dca8dffe550a2f28bf80e5f9387c850f540306a2413026fe3d5d25243edf
|
