Calling the Hamiltonian Fast Marching library from Python
The HamiltonFastMarching code can be used from Python in two ways:
-
using the executable FileHFM, which has no external dependencies
-
using the library PythonHFM, compiled with pybind11
The two methods provide similar functionality. Option 1. is easier to compile, whereas 2. offers faster input/output.
For option 1, change directory to ../FileHFM, and compile using CMake.
When compiling with 2, you need to correctly set the path to the python executable. Indeed, there are usually multiple python distributions on a system, and the PythonHFM library will not work if incorrectly linked. Type "which python" in a terminal to find about this path.
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