ISPY2 Dataset Curation for Breast Cancer pCR Prediction

Implementation of the ISPY2 dataset curation pipeline for breast cancer pathologic complete response (pCR) prediction from our publication "Graph Representation Learning of Longitudinal Medical Imaging Trajectories for Treatment Response Prediction".

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Citation

@article{kiechle2026graph,
title={Graph Representation Learning of Longitudinal Medical Imaging Trajectories for Treatment Response Prediction},
author={Kiechle, Johannes and Osuala, Richard and Lang, Daniel M and Fischer, Stefan M and Jan{\'\i}{\v{c}}kov{\'a}, Ivana and Lekadir, Karim and Schnabel, Julia A and Peeken, Jan C},
journal={arXiv preprint arXiv:2607.04912},
year={2026}
}

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