Combining gene-set analysis with network properties.
Project description
For a proper installation of Kiwi, follow the instructions in the Documentation.
For a quick flavor of Kiwi, you can download the package from the Python Package Index (PyPI), extract it, open the command-prompt, navigate to the root directory, and run:
> python -c “import kiwi; -gsn kiwi/demo/GSN.txt -gss kiwi/demo/GSS_LUAD.txt -gls kiwi/demo/GLS_LUAD.txt -gsc kiwi/demo/GSC_LUAD.txt”
This command fails if the dependencies (chiefly numpy, matplotlib, networkx) are not properly installed for the Python interpreter called by the command prompt.
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