OpenSpecimenAPIconnector 0.9.4

Python API commands to interact with OpenSpecimen

OpenSpecimenAPIconnector.py

Version 0.9.2 python framework for importing, exporting and combining various data entries from OpenSpecimen and Molgenis

Info about OpenSpecimen: https://openspecimen.atlassian.net/wiki/spaces/CAT/overview

Code can be found at https://github.com/bibbox/OpenSpecimenAPIconnector.py
Find the Documentation at https://openspecimenapiconnectorpy.readthedocs.io/en/latest/index.html

General Framework strucutre (Early Alpha Stage. More Updates Soon):

In general the Framework is comprised of 2 individual Levels:

• core_OS/MG: contains the core classes that handle 1 call operations like get/set/post/put for Molgenis and OpenSpecimen, the requests are generated here such that OpenSpecimen's needs are fullfilled and it generates json-formatted strings, which OpenSpecimen can read according to the different entities.
  
• utility_OS/MG/merge contains classes that handle combinations of the mehtods given in the core level to accomplish more complex operations (combining 2 or more API calls) like creating of collections and participants.
  
• All further operations are then handled via python scripts that use the methods from above to implement the desired functionality.