Realistic synthetic pedigree generation, visualization, and file export.
Project description
Pedigree Generation Package
PedGen is a python package that can be used to generate genetically realistic pedigrees. Generated pedigrees can be visualized as directed acyclic graphs and exported in PED file format.
Prerequisites
Some functionality included in PedGen relies on system-level dependencies, namely in instalation of Graphviz. Please ensure Graphviz is installed before using the pedigree visualization functionality:
Unix
sudo apt install graphviz libgraphviz-dev
macOS(Homebrew)
brew install graphviz
Installation
All required Python dependencies will be installed automatically with this package using pip.
pip install PedGen
Usage
License
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