Search a list of peptides in a fasta file (or proteome) and returns exact matches or hits with one mismatch
Project description
Useful tools to work with Elastic stack in Python
Description
This tool consists one module:
PeptideSearch: this tool searches for peptides in a fasta file including proteins, it can find Exact Match or Marches with up to One Mismatch
Installation
Normal installation
pip install PeptideSearch
Development installation
git clone https://github.com/khaledianehdieh/PeptideSearch.git
Change log
[0.1] - 2021-08-02
- Created
Project details
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