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Integrated GWAS and genomic prediction pipeline with a GUI for plant genomics.

Project description

PlantOmicsGwas: An Integrated GWAS and Genomic Prediction Pipeline for Plant Genomes

Developers & Contributors

Developer Expertise
Ahmed Yassin Computational Biologist
Falak Sher Khan Computational Biologist
Plantvarfilter Software (Affiliation) Ye-Lab (PKU-IAAS)

Developed By:

  • Ahmed Yassin, Computational Biologist || PhD Candidate
  • Falak Sher Khan, Computational Biologist ( Peking University Institute of Advanced Agricultural Science, PKU-IAAS)

⚠️ Early Demonstration Release (v0.1.0)

PlantOmicsGwas v0.1.0 is the first public demonstration release of the software and is intended exclusively for evaluation, testing, and feedback from researchers, collaborators, and the plant genomics community.

The platform is currently under active development. Although the core analytical workflow is functional, we are continuously improving computational performance, large-scale genomic data processing, workflow efficiency, the graphical user interface, and the overall user experience.

Following the publication of our accompanying research manuscript, we will release the complete production version of PlantOmicsGwas, including comprehensive documentation, finalized software licensing, detailed installation guides, tutorials, and the full implementation of all planned analytical modules.

We sincerely appreciate feedback from researchers and early adopters, as it will play an important role in the continued refinement and development of the platform.

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