Ribo-Seq Unit Step Transformation
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This tool is designed for ribo-seq data and produces a metafootprint profile that reveals the influence of mRNA features such as codons/amino acids on the relative read density in the sample across the entire ribosome and nascent peptide region. The Kullback-Leibler divergence across these sites is also provided.
An online version is available on RiboGalaxy.
Author: Patrick O’Connor
Citation
Surveying the relative impact of mRNA features on local ribosome profiling read density in 28 datasets.
Patrick O’Connor, Dmitry Andreev, Pavel Baranov
bioRxiv doi: http://dx.doi.org/10.1101/018762
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| File Name & Checksum SHA256 Checksum Help | Version | File Type | Upload Date |
|---|---|---|---|
| RUST-0.1.1-py2-none-any.whl (30.3 kB) Copy SHA256 Checksum SHA256 | py2 | Wheel | Oct 20, 2015 |
| RUST-0.1.1.tar.gz (13.9 kB) Copy SHA256 Checksum SHA256 | – | Source | Oct 20, 2015 |
