consensus clustering enhances spatial domain detection for spatial transcriptomics data.
Project description
STCC
STCC is a novel consensus clustering framework designed for spatial transcriptomics data, which enhances spatial domain detection by integrating outcomes from various state-of-the-art tools using consensus strategies such as Average-based, Onehot-based,Hypergraph-based, and wNMF-based methods.
The algorithms implemented by STCC are:
- Average-based
- Onehot-based
- wNMF-based
Installation
Install STCC via PyPI by running
pip install STCC==1.0.3
Tutorial
Access our documentation via github for installation, tutorials, examples, and more.
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