SURE: SUccinct REpresentation of cells

SURE implements a discrete latent state model with normalizing flow encoder for exact estimation of cellular populations.

Installation

  1. Create a virtual environment
conda create -n SURE python=3.10 scipy numpy pandas scikit-learn && conda activate SURE
  1. Install PyTorch following the official instruction.
pip3 install torch torchvision --index-url https://download.pytorch.org/whl/cu126
  1. Install SURE
pip3 install SURE-tools

Project links

Key dates

PyPI data
Data sourced directly from PyPI's database.
  • Released:
Newer release available (4.18.25)

1 maintainer

PyPI data
Data sourced directly from PyPI's database.
Avatar for ZengFLab from gravatar.com ZengFLab

Credits

Author: Feng Zeng

License

MIT License

Requires

Python >=3.10

Classifiers

Report project as malware

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

sure_tools-4.18.16.tar.gz (101.7 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

sure_tools-4.18.16-py3-none-any.whl (109.0 kB view details)

Uploaded Python 3

File details

Details for the file sure_tools-4.18.16.tar.gz.

File metadata

  • Download URL: sure_tools-4.18.16.tar.gz
  • Upload date:
  • Size: 101.7 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/7.0.0 CPython/3.10.18

File hashes

Hashes for sure_tools-4.18.16.tar.gz
Algorithm Hash digest
SHA256 bc3e9e45bf63c8502090a7b19a93992b596828dc14d2fab47722d27d31b32dd0
MD5 1b2b2384cbd0a5dde19dcf23987f1270
BLAKE2b-256 dbc91b818d309f1c70c6a08b17a561437a81908aee4cdf8488cb957853270674

See more details on using hashes here.

File details

Details for the file sure_tools-4.18.16-py3-none-any.whl.

File metadata

  • Download URL: sure_tools-4.18.16-py3-none-any.whl
  • Upload date:
  • Size: 109.0 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/7.0.0 CPython/3.10.18

File hashes

Hashes for sure_tools-4.18.16-py3-none-any.whl
Algorithm Hash digest
SHA256 a03b326d804b0820cb397da24cb3834fedf328a557f9c3804b172d2af8760ea6
MD5 66470cf3d0659bf4157cb32f3473d98e
BLAKE2b-256 0043a49752ab6ae4bc20145fd62f5b1d351a8cd803765ceb4555fc8d76813e55

See more details on using hashes here.

Release history Release notifications | RSS feed

4.18.25

2 files

4.18.24

2 files

4.18.23

2 files

4.18.22

2 files

4.18.21

2 files

4.18.20

2 files

4.18.19

2 files

4.18.18

2 files

4.18.17

2 files

This release

4.18.16 This release

2 files

4.18.15

2 files

4.18.14

2 files

4.18.13

2 files

4.18.12

2 files

4.18.11

2 files

4.18.10

2 files

4.18.9

2 files

4.18.8

2 files

4.18.7

2 files

4.18.6

2 files

4.18.5

2 files

4.18.4

2 files

4.18.3

2 files

4.18.2

2 files

4.18.1

2 files

4.18.0

2 files

4.17.7

2 files

4.17.6

2 files

4.17.5

2 files

4.17.4

2 files

4.17.3

2 files

4.17.2

2 files

4.17.1

2 files

4.17.0

2 files

4.16.0

2 files

4.15.0

2 files

4.14.47

2 files

4.14.46

2 files

4.14.45

2 files

4.14.44

2 files

4.14.43

2 files

4.14.42

2 files

4.14.41

2 files

4.14.40

2 files

4.14.39

2 files

4.14.38

2 files

4.14.36

2 files

4.14.35

2 files

4.14.34

2 files

4.14.33

2 files

4.14.32

2 files

4.14.31

2 files

4.14.30

2 files

4.14.29

2 files

4.14.28

2 files

4.14.27

2 files

4.14.26

2 files

4.14.25

2 files

4.14.24

2 files

4.14.23

2 files

4.14.22

2 files

4.14.21

2 files

4.14.20

2 files

4.14.19

2 files

4.14.18

2 files

4.14.17

2 files

4.14.16

2 files

4.14.15

2 files

4.14.14

2 files

4.14.13

2 files

4.14.12

2 files

4.14.11

2 files

4.14.10

2 files

4.14.9

2 files

4.14.8

2 files

4.14.7

2 files

4.14.6

2 files

4.14.5

2 files

4.14.4

2 files

4.14.3

2 files

4.14.2

2 files

4.14.1

2 files

4.14.0

2 files

4.13.3

2 files

4.13.2

2 files

4.13.1

2 files

4.13.0

2 files

4.12.0

2 files

4.11.5

2 files

4.11.4

2 files

4.11.1

2 files

4.11.0

2 files

4.10.10

2 files

4.10.9

2 files

4.10.8

2 files

4.10.7

2 files

4.10.6

2 files

4.10.5

2 files

4.10.4

2 files

4.10.3

2 files

4.10.2

2 files

4.10.1

2 files

4.10.0

2 files

4.9.7

2 files

4.9.6

2 files

4.9.5

2 files

4.9.4

2 files

4.9.3

2 files

4.9.2

2 files

4.9.1

2 files

4.9.0

2 files

4.8.10

2 files

4.8.9

2 files

4.8.8

2 files

4.8.7

2 files

4.8.6

2 files

4.8.5

2 files

4.8.4

2 files

4.8.3

2 files

4.8.2

2 files

4.8.1

2 files

4.8.0

2 files

4.7.8

2 files

4.7.7

2 files

4.7.6

2 files

4.7.5

2 files

4.7.4

2 files

4.7.3

2 files

4.7.2

2 files

4.7.1

2 files

4.7.0

2 files

4.6.10

2 files

4.6.9

2 files

4.6.8

2 files

4.6.7

2 files

4.6.6

2 files

4.6.5

2 files

4.6.4

2 files

4.6.3

2 files

4.6.2

2 files

4.6.1

2 files

4.6.0

2 files

4.5.18

2 files

4.5.17

2 files

4.5.16

2 files

4.5.15

2 files

4.5.14

2 files

4.5.13

2 files

4.5.12

2 files

4.5.11

2 files

4.5.10

2 files

4.5.9

2 files

4.5.8

2 files

4.5.7

2 files

4.5.6

2 files

4.5.5

2 files

4.5.4

2 files

4.5.3

2 files

4.5.2

2 files

4.5.1

2 files

4.5.0

2 files

4.4.10

2 files

4.4.9

2 files

4.4.8

2 files

4.4.7

2 files

4.4.6

2 files

4.4.5

2 files

4.4.4

2 files

4.4.3

2 files

4.4.2

2 files

4.4.1

2 files

4.4.0

2 files

4.3.0

2 files

4.2.6

2 files

4.2.5

2 files

4.2.4

2 files

4.2.3

2 files

4.2.2

2 files

4.2.1

2 files

4.2.0

2 files

4.1.1

2 files

4.1.0

2 files

4.0.30

2 files

4.0.29

2 files

4.0.28

2 files

4.0.27

2 files

4.0.26

2 files

4.0.25

2 files

4.0.24

2 files

4.0.23

2 files

4.0.22

2 files

4.0.21

2 files

4.0.20

2 files

4.0.19

2 files

4.0.18

2 files

4.0.17

2 files

4.0.16

2 files

4.0.15

2 files

4.0.14

2 files

4.0.13

2 files

4.0.12

2 files

4.0.11

2 files

4.0.10

2 files

4.0.9

2 files

4.0.8

2 files

4.0.7

2 files

4.0.6

2 files

4.0.5

2 files

4.0.4

2 files

4.0.3

2 files

4.0.2

2 files

4.0.1

2 files

4.0.0

2 files

3.7.4

2 files

3.7.3

2 files

3.7.2

2 files

3.7.1

2 files

3.7.0

2 files

3.6.14

2 files

3.6.13

2 files

3.6.12

2 files

3.6.11

2 files

3.6.10

2 files

3.6.9

2 files

3.6.8

2 files

3.6.7

2 files

3.6.6

2 files

3.6.5

2 files

3.6.4

2 files

3.6.3

2 files

3.6.2

2 files

3.6.1

2 files

3.6.0

2 files

3.5.27

2 files

3.5.26

2 files

3.5.25

2 files

3.5.24

2 files

3.5.23

2 files

3.5.22

2 files

3.5.21

2 files

3.5.20

2 files

3.5.19

2 files

3.5.18

2 files

3.5.17

2 files

3.5.16

2 files

3.5.15

2 files

3.5.14

2 files

3.5.13

2 files

3.5.12

2 files

3.5.11

2 files

3.5.10

2 files

3.5.9

2 files

3.5.8

2 files

3.5.7

2 files

3.5.6

2 files

3.5.5

2 files

3.5.4

2 files

3.5.3

2 files

3.5.2

2 files

3.5.1

2 files

3.5.0

2 files

3.4.29

2 files

3.4.28

2 files

3.4.27

2 files

3.4.26

2 files

3.4.25

2 files

3.4.24

2 files

3.4.23

2 files

3.4.22

2 files

3.4.21

2 files

3.4.20

2 files

3.4.19

2 files

3.4.18

2 files

3.4.17

2 files

3.4.16

2 files

3.4.15

2 files

3.4.14

2 files

3.4.13

2 files

3.4.12

2 files

3.4.10

1 file

3.4.9

2 files

3.4.8

2 files

3.4.7

2 files

3.4.6

2 files

3.4.5

2 files

3.4.4

2 files

3.4.3

2 files

3.4.2

2 files

3.4.1

2 files

3.4.0

2 files

3.3.37

2 files

3.3.36

2 files

3.3.35

2 files

3.3.34

2 files

3.3.33

2 files

3.3.32

2 files

3.3.31

2 files

3.3.30

2 files

3.3.29

2 files

3.3.28

2 files

3.3.27

2 files

3.3.26

2 files

3.3.25

2 files

3.3.24

2 files

3.3.23

2 files

3.3.22

2 files

3.3.21

2 files

3.3.20

2 files

3.3.19

2 files

3.3.18

2 files

3.3.17

2 files

3.3.16

2 files

3.3.15

2 files

3.3.14

2 files

3.3.13

2 files

3.3.12

2 files

3.3.11

2 files

3.3.10

2 files

3.3.9

2 files

3.3.8

2 files

3.3.7

2 files

3.3.6

2 files

3.3.5

2 files

3.3.4

2 files

3.3.3

2 files

3.3.2

2 files

3.3.1

2 files

3.3.0

2 files

3.2.41

2 files

3.2.40

2 files

3.2.39

2 files

3.2.38

2 files

3.2.37

2 files

3.2.36

2 files

3.2.35

2 files

3.2.34

2 files

3.2.33

2 files

3.2.32

2 files

3.2.31

2 files

3.2.30

2 files

3.2.29

2 files

3.2.28

2 files

3.2.27

2 files

3.2.26

2 files

3.2.25

2 files

3.2.24

2 files

3.2.23

2 files

3.2.22

2 files

3.2.21

2 files

3.2.20

2 files

3.2.19

2 files

3.2.18

2 files

3.2.17

2 files

3.2.16

2 files

3.2.15

2 files

3.2.14

2 files

3.2.13

2 files

3.2.12

2 files

3.2.11

2 files

3.2.10

2 files

3.2.9

2 files

3.2.8

2 files

3.2.7

2 files

3.2.6

2 files

3.2.5

2 files

3.2.4

2 files

3.2.3

2 files

3.2.2

2 files

3.2.1

2 files

3.2.0

2 files

3.1.9

2 files

3.1.8

2 files

3.1.7

2 files

3.1.6

2 files

3.1.5

2 files

3.1.4

2 files

3.1.3

2 files

3.1.2

2 files

3.1.1

2 files

3.1.0

2 files

3.0.10

2 files

3.0.9

2 files

3.0.8

2 files

3.0.7

2 files

3.0.6

2 files

3.0.5

2 files

3.0.4

2 files

3.0.3

2 files

3.0.2

2 files

3.0.1

2 files

3.0.0

2 files

2.4.104

2 files

2.4.103

2 files

2.4.102

2 files

2.4.101

2 files

2.4.100

2 files

2.4.99

2 files

2.4.98

2 files

2.4.97

2 files

2.4.96

2 files

2.4.95

2 files

2.4.94

2 files

2.4.93

2 files

2.4.92

2 files

2.4.91

2 files

2.4.90

2 files

2.4.89

2 files

2.4.88

2 files

2.4.87

2 files

2.4.86

2 files

2.4.85

2 files

2.4.84

2 files

2.4.83

2 files

2.4.82

2 files

2.4.81

2 files

2.4.80

2 files

2.4.79

2 files

2.4.78

2 files

2.4.77

2 files

2.4.76

2 files

2.4.75

2 files

2.4.74

2 files

2.4.73

2 files

2.4.72

2 files

2.4.71

2 files

2.4.70

2 files

2.4.69

2 files

2.4.68

2 files

2.4.67

2 files

2.4.66

2 files

2.4.65

2 files

2.4.64

2 files

2.4.63

2 files

2.4.60

2 files

2.4.59

2 files

2.4.58

2 files

2.4.57

2 files

2.4.56

2 files

2.4.55

2 files

2.4.54

2 files

2.4.53

2 files

2.4.52

2 files

2.4.51

2 files

2.4.50

2 files

2.4.49

2 files

2.4.48

2 files

2.4.47

2 files

2.4.45

2 files

2.4.44

2 files

2.4.43

2 files

2.4.42

2 files

2.4.41

2 files

2.4.40

2 files

2.4.39

2 files

2.4.38

2 files

2.4.37

2 files

2.4.36

2 files

2.4.35

2 files

2.4.34

2 files

2.4.33

2 files

2.4.32

2 files

2.4.31

2 files

2.4.29

2 files

2.4.28

2 files

2.4.25

2 files

2.4.24

2 files

2.4.23

2 files

2.4.22

2 files

2.4.21

2 files

2.4.20

2 files

2.4.19

2 files

2.4.18

2 files

2.4.17

2 files

2.4.16

2 files

2.4.15

2 files

2.4.14

2 files

2.4.13

2 files

2.4.12

2 files

2.4.11

2 files

2.4.10

2 files

2.4.9

2 files

2.4.8

2 files

2.4.7

2 files

2.4.6

2 files

2.4.5

2 files

2.4.4

2 files

2.4.3

2 files

2.4.2

2 files

2.4.1

2 files

2.4.0

2 files

2.3.2

2 files

2.3.1

2 files

2.3.0

2 files

2.2.28

2 files

2.2.27

2 files

2.2.26

2 files

2.2.25

2 files

2.2.24

2 files

2.2.23

2 files

2.2.21

2 files

2.2.20

2 files

2.2.19

2 files

2.2.18

2 files

2.2.17

2 files

2.2.16

2 files

2.2.15

2 files

2.2.14

2 files

2.2.13

2 files

2.2.12

2 files

2.2.11

2 files

2.2.10

2 files

2.2.9

2 files

2.2.8

2 files

2.2.7

2 files

2.2.6

2 files

2.2.5

2 files

2.2.4

2 files

2.2.3

2 files

2.2.2

2 files

2.2.1

2 files

2.2.0

2 files

2.1.92

2 files

2.1.91

2 files

2.1.90

2 files

2.1.89

2 files

2.1.88

2 files

2.1.87

2 files

2.1.86

2 files

2.1.85

2 files

2.1.84

2 files

2.1.83

2 files

2.1.82

2 files

2.1.81

2 files

2.1.80

2 files

2.1.79

2 files

2.1.78

2 files

2.1.77

2 files

2.1.76

2 files

2.1.74

2 files

2.1.73

2 files

2.1.71

2 files

2.1.70

2 files

2.1.69

2 files

2.1.68

2 files

2.1.67

2 files

2.1.66

2 files

2.1.65

2 files

2.1.64

2 files

2.1.63

2 files

2.1.62

2 files

2.1.61

2 files

2.1.60

2 files

2.1.59

2 files

2.1.58

2 files

2.1.57

2 files

2.1.56

2 files

2.1.55

2 files

2.1.54

2 files

2.1.53

2 files

2.1.52

2 files

2.1.51

2 files

2.1.50

2 files

2.1.49

2 files

2.1.48

2 files

2.1.47

2 files

2.1.46

2 files

2.1.45

2 files

2.1.44

2 files

2.1.43

2 files

2.1.42

2 files

2.1.41

2 files

2.1.40

2 files

2.1.39

2 files

2.1.38

2 files

2.1.37

2 files

2.1.36

2 files

2.1.35

2 files

2.1.34

2 files

2.1.33

2 files

2.1.32

2 files

2.1.31

2 files

2.1.30

2 files

2.1.29

2 files

2.1.28

2 files

2.1.27

2 files

2.1.26

2 files

2.1.25

2 files

2.1.24

2 files

2.1.22

2 files

2.1.21

2 files

2.1.20

2 files

2.1.19

2 files

2.1.18

2 files

2.1.17

2 files

2.1.16

2 files

2.1.15

2 files

2.1.14

2 files

2.1.13

2 files

2.1.12

2 files

2.1.11

2 files

2.1.10

2 files

2.1.9

2 files

2.1.8

2 files

2.1.7

2 files

2.1.6

2 files

2.1.5

2 files

2.1.4

2 files

2.1.3

2 files

2.1.2

2 files

2.1.1

2 files

2.1.0

2 files

2.0.10

2 files

2.0.9

2 files

2.0.8

2 files

2.0.7

2 files

2.0.6

2 files

2.0.5

2 files

2.0.4

2 files

2.0.3

2 files

2.0.2

2 files

2.0.1

2 files

1.0.10

2 files

1.0.9

2 files

1.0.8

2 files

1.0.7

2 files

1.0.6

2 files

1.0.5

2 files

1.0.4

2 files

1.0.3

2 files

1.0.2

2 files

1.0.1

2 files

Anthropic, PBC Visionary sponsor Bloomberg Visionary sponsor Hudson River Trading Visionary sponsor Meta Visionary sponsor NVIDIA Visionary sponsor Microsoft Sustainability sponsor Depot Continuous Integration AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page