A toolset to work with proteins
Project description
This suite of python scripts was built to access the PDB database and both prepare inputs and read generated output files.
It relies mainly on Biopython and Biopandas to manipulate PDB structures in convenient ways.
Simply run AccessPDB to perform some of these functions intuitively.
The Toolbox is packed up with functions that can be imported and used in your own scripts.
Installation
The scripts are available as a PyPi project. Just install them with:
pip install Structuralia
Prerequisites
The following packages and external programs are used by Structuralia scripts and must be installed and in either the binaries path or python path.
Python packages
progressbar
pandas
biopython
biopandas
pathlib
parasail
External software (must be installed separately)
License
This project is licensed under GNU license, provided along with the package - see LICENSE.
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