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The tripvote Python software

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This is an implementation of tripVote: complete a set of gene trees to maximize the quartet score. The core algorithm is the Maximum Triplet Rooting (MTR) problem: Root a tree T according to a reference tree R such that the triplet score of T and R is maximized. The algorithm and the code heavily depend on the tqDist software http://birc.au.dk/software/tqDist/. We would like to thank the authors for the code and algorithmic ideas.

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