Skip to main content

Virtual Microbe Evolutionary Simulator

Project description

README

Virtual Microbes Evolutionary Simulator

Features

  • Individual based model of evolving microbes.
  • Explicit model of evolving genome.
  • Spatially extended environment.
  • Microbes evolve metabolic capacities to exploit environmental nutrients.

Dependencies and scripts

Install

pip install VirtualMicrobes

Usage

can’t wait to simulate:

vermicelli.py evo <simulation_dir>

open pandora’s box of options:

  • vermicelli.py --help
  • vermicelli.py evo --help

Documentation

http://virtualmicrobes.readthedocs.io/en/latest/ (in progress..) CHANGELOG ———

nothing changed here

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for VirtualMicrobes, version 0.2.5
Filename, size File type Python version Upload date Hashes
Filename, size VirtualMicrobes-0.2.5.tar.gz (817.6 kB) File type Source Python version None Upload date Hashes View

Supported by

Pingdom Pingdom Monitoring Google Google Object Storage and Download Analytics Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN DigiCert DigiCert EV certificate StatusPage StatusPage Status page