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Virtual Microbe Evolutionary Simulator

Project Description

README

Virtual Microbes Evolutionary Simulator

Features

  • Individual based model of evolving microbes.
  • Explicit model of evolving genome.
  • Spatially extended environment.
  • Microbes evolve metabolic capacities to exploit environmental nutrients.

Dependencies and scripts

Install

pip install VirtualMicrobes

Usage

can’t wait to simulate:

vermicelli.py evo <simulation_dir>

open pandora’s box of options:

  • vermicelli.py --help
  • vermicelli.py evo --help

Documentation

http://virtualmicrobes.readthedocs.io/en/latest/ (in progress..) CHANGELOG ———

nothing changed here

Release history Release notifications

This version
History Node

0.1.4

History Node

0.1.3

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Filename, size & hash SHA256 hash help File type Python version Upload date
VirtualMicrobes-0.1.4.tar.gz (3.6 MB) Copy SHA256 hash SHA256 Source None Oct 12, 2016

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