acdc-aws-etl-pipeline

Infrastructure and code for the ACDC ETL pipeline and data operations in AWS

Ingestion

DBT

Release Management

Deploying the dictionary

e.g. to testing

# Example 
bash services/dictionary/pull_dict.sh <raw_dictionary_url>
bash services/dictionary/upload_dictionary.py <local_dictionary_path> <s3_target_uri>

# implementation
VERSION=v0.6.0
bash services/dictionary/pull_dict.sh "https://raw.githubusercontent.com/AustralianBioCommons/acdc-schema-json/refs/tags/${VERSION}/dictionary/prod_dict/acdc_schema.json"
python3 services/dictionary/upload_dictionary.py "services/dictionary/schemas/acdc_schema_${VERSION}.json" s3://gen3schema-cad-uat-biocommons.org.au/cad.json

Generating synthetic metadata

  • Run this script to generate synthetic metadata for the studies in the dictionary
bash services/synthetic_data/generate_synth_metadata.sh

Key dates

PyPI data
Data sourced directly from PyPI's database.
  • Released:
Newer release available (1.5.4)

1 maintainer

PyPI data
Data sourced directly from PyPI's database.
Avatar for harjo391 from gravatar.com harjo391

Credits

Author: JoshuaHarris391

Requires

Python <4.0.0, >=3.9.5

Classifiers

Report project as malware

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

acdc_aws_etl_pipeline-0.2.2.tar.gz (17.4 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

acdc_aws_etl_pipeline-0.2.2-py3-none-any.whl (20.6 kB view details)

Uploaded Python 3

File details

Details for the file acdc_aws_etl_pipeline-0.2.2.tar.gz.

File metadata

  • Download URL: acdc_aws_etl_pipeline-0.2.2.tar.gz
  • Upload date:
  • Size: 17.4 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: poetry/2.2.1 CPython/3.9.23 Linux/6.11.0-1018-azure

File hashes

Hashes for acdc_aws_etl_pipeline-0.2.2.tar.gz
Algorithm Hash digest
SHA256 75acd47c520b327d6c9e60ef23576b8f859929db7965ea2f8ba60da13be36a6c
MD5 0aef347b6c661e694aecfc6221a6da50
BLAKE2b-256 f99926512a05c4e7a215b77873ed6775e51a07cf36a1a1ff0fefb33b7917f86f

See more details on using hashes here.

File details

Details for the file acdc_aws_etl_pipeline-0.2.2-py3-none-any.whl.

File metadata

File hashes

Hashes for acdc_aws_etl_pipeline-0.2.2-py3-none-any.whl
Algorithm Hash digest
SHA256 1d244cb8b3d6b11daa00ce44be60123c4285007b11b7a97fa805edd017ee5bc8
MD5 629a56651bfea79590d64103786273ab
BLAKE2b-256 20afbb5cd1518441e5a394111f5a8387dab269c76ba39c4d5de23a9b4cad1dc9

See more details on using hashes here.

Release history Release notifications | RSS feed

1.5.4

2 files

1.5.3

2 files

1.5.2

2 files

1.5.1

2 files

1.5.0

2 files

1.2.0

2 files

1.1.0

2 files

1.0.1

2 files

1.0.0

2 files

0.9.9

2 files

0.9.8

2 files

0.9.7

2 files

0.9.6

2 files

0.9.5

2 files

0.9.4

2 files

0.9.3

2 files

0.9.2

2 files

0.9.1

2 files

0.9.0

2 files

0.8.2

2 files

0.8.1

2 files

0.8.0

2 files

0.7.6

2 files

0.7.5

2 files

0.7.4

2 files

0.7.3

2 files

0.7.2

2 files

0.7.1

2 files

0.7.0

2 files

0.6.9

2 files

0.6.8

2 files

0.6.7

2 files

0.6.6

2 files

0.6.5

2 files

0.6.4

2 files

0.6.3

2 files

0.6.2

2 files

0.6.1

2 files

0.6.0

2 files

0.5.9

2 files

0.5.8

2 files

0.5.7

2 files

0.5.6

2 files

0.5.5

2 files

0.5.4

2 files

0.5.3

2 files

0.5.2

2 files

0.5.1

2 files

0.5.0

2 files

0.4.9

2 files

0.4.8

2 files

0.4.7

2 files

0.4.6

2 files

0.4.5

2 files

0.4.3

2 files

0.4.2

2 files

0.4.1

2 files

0.4.0

2 files

0.3.9

2 files

0.3.8

2 files

0.3.7

2 files

0.3.6

2 files

0.3.5

2 files

0.3.4

2 files

0.3.3

2 files

0.3.2

2 files

0.3.1

2 files

0.3.0

2 files

0.2.9

2 files

0.2.8

2 files

0.2.7

2 files

0.2.6

2 files

0.2.5

2 files

0.2.4

2 files

0.2.3

2 files

This release

0.2.2 This release

2 files

0.2.1

2 files

0.2.0

2 files

0.1.9

2 files

0.1.8

2 files

0.1.7

2 files

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page