Package for adding columns of data to FCS files as additional channels
Project description
add-labels-to-fcs
This repository includes code for adding data labels to FCS files as additional data channels. It also adds labels a grid that can be gated in standard flow cytometry software. The package is in active development, and more features will be added here.
Installation
pip install add-labels-to-fcs
Basic Usage
To add data columns (unmodified) to an FCS file using command line interface:
add-labels-to-fcs file.fcs labels.xlsx new_file.fcs
To add data columns in a grid to facilitate gating using command line interface:
add-labels-as-grid-to-fcs file.fcs labels.xlsx new_file.fcs
To use library functions in your own python scripts, import the following:
from add-labels-to-fcs import add_labels
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