af3io
Collection of eclectic utilities for AlphaFold 3:
- Copy data pipeline output from existing results: datafill.ipynb (open in Colab)
- Differences between input JSON files: input_diff.ipynb (open in Colab)
- Set the
nameattribute of input JSONs to match their file names:af3io fixname inputs/*.json(use--checkto only report mismatches) - Collect summary confidences and interface scores (ipSAE, LIS, pDockQ, ...) from output directories or zip files, including predictions nested in other archives (tar, zip, gzip, zstd):
af3io summary-confidences predictions/ pools_5k.tar summary_confidences.parquet - Compress confidences JSONs (experimental): confidences-compress.ipynb (open in Colab)
1 maintainer
Metadata
1 maintainer
Release files for af3io 26.10
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | |
|---|---|---|---|---|
| af3io-26.10.tar.gz | 41.9 kB | With provenance | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| af3io-26.10-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 78.1 kB
Release files / af3io-26.10.tar.gz
| Download URL | af3io-26.10.tar.gz |
|---|---|
| Size | 41.9 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
70b07de4d01f7501911c6acd46d814e5179205cd9a46e48dec39b7ed01e2a041
|
|
BLAKE2b-256 checksum How to use checksums |
019ec5e9ae3f9e51a199990d2146593123e47bd32b8022054d36715e1435b501
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Oct 19, 2026.
Transparency logRelease files / af3io-26.10-py3-none-any.whl
| Download URL | af3io-26.10-py3-none-any.whl |
|---|---|
| Size | 36.2 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
f1ae47ac8e08df593c5f6154ffbfa10b09ef4fef7ea3d9050dcb7225f310230d
|
|
BLAKE2b-256 checksum How to use checksums |
dcc161b140bf35919acd1019fa898d123452ca76583b07747bff5f6c930d74fc
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Oct 19, 2026.
Transparency logSecurity for af3io 26.10
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
Full provenance
All 2 files in this release have been uploaded with provenance metadata.
Attestation for af3io-26.10.tar.gz
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Oct 19, 2026.
Transparency logA note on package security
PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.
To learn more about protecting yourself from malicious actors, visit our package security documentation.
