ai-afterimage 0.7.0

Episodic memory for Claude Code - persistent memory of code written across sessions with churn tracking

AI-AfterImage

Episodic memory for AI coding agents.

Like the visual phenomenon where an image persists after you look away - AfterImage gives Claude Code persistent memory of code it has written across sessions.

The Problem

Claude Code starts every session with amnesia. Even though transcripts exist with every Write/Edit ever made, Claude can't remember:

• What code it wrote yesterday
• How it solved a similar problem last week
• Patterns it has used before in this codebase

Users re-explain context. Claude rewrites similar solutions. Institutional knowledge is lost.

The Solution

A Claude Code hook that:

1. Pre-Write: Searches KB for related past code before writing
2. Injects: "You wrote this before..." with relevant examples
3. Post-Write: Extracts and stores the diff for future recall

Write/Edit hook fires
        |
        v
   Is this code?
   (not .md/.json/etc)
        |
        v
   Search KB for similar
        |
   +----+----+
Found      Not Found
   |           |
   v           v
Inject     Just write
context
   |           |
   +-----+-----+
         v
   Claude writes
         |
         v
   Extract diff
   Store in KB

Features

• Claude Code hook (pre/post Write/Edit)
• Local SQLite + embeddings KB
• Hybrid search (keyword + semantic)
• Personal developer memory
• Session-to-session continuity
• No cloud, no API calls - everything local
• Works offline after initial model download
• CLI for search and management
• v0.2.1: Optional PostgreSQL backend with pgvector
• v0.3.0: Semantic Chunking for smarter context injection
• v0.4.0: Config enhancement for PostgreSQL password fallback
• v0.5.0: Code Intelligence - language detection, AST parsing, semantic index
• v0.6.0: Codex transcript support - session_meta IDs, apply_patch parsing, multi-format extraction

Recent Changes

v0.6.0 (2026-02-06)

• Added OpenAI Codex transcript support in the extract module
• Support for session_meta session ID extraction
• Support for response_item envelope format (function_call + custom_tool_call)
• apply_patch unified diff parsing for file additions and updates
• Comprehensive tests for all new Codex transcript formats

v0.5.2 (2026-02-06)

• Fixed CLI version to use package metadata
• Updated README for Code Intelligence release

Code Intelligence (v0.5.0)

AfterImage now has semantic code understanding - not just text embeddings.

Language Detection

• Pattern-based detection for 20+ programming languages
• Confidence scoring for ambiguous files
• Polyglot file support (HTML with embedded JS/CSS)
• Handles extensionless scripts (shebangs, etc.)

AST Parsing (tree-sitter based)

• Multi-language support: Python, JavaScript/TypeScript, Rust, C, Go
• Incremental parsing for large files
• Semantic extraction: functions, classes, imports, dependencies

Semantic Index

• Symbol tables with scope-aware resolution
• Go-to-definition across files
• Find all references
• Call graph generation
• Hover information provider
• Basic type inference

Install with code intelligence features:

pip install ai-afterimage[ast]

See docs/code_intelligence.md for full documentation.

Semantic Chunking (v0.3.0)

AfterImage now includes intelligent context injection that:

• Parses code into semantic units - Functions, classes, methods instead of raw files
• Scores snippets by relevance - Recency (20%), proximity (25%), semantic similarity (35%), project awareness (20%)
• Summarizes similar snippets - Groups 3+ similar snippets to reduce token usage
• Caches results - 108x speedup on repeated operations

Enable via ~/.afterimage/config.yaml:

semantic_chunking:
  enabled: true
  max_tokens: 2000
  summarization:
    enabled: true
    summary_mode_threshold: 3

See docs/semantic_chunking.md for full documentation.

Code Churn Tracking (v0.3.0)

AfterImage now tracks file and function modification patterns:

• Tier Classification - Files categorized as Gold (stable), Silver (normal), Bronze (active), Red (hot)
• Smart Warnings - Alerts before modifying stable files or frequently-changed functions
• Function-Level Tracking - AST-based detection for Python, regex for other languages
• Session-Aware - Track edits across Claude Code sessions

Churn Tier System

Tier	Edits (30d)	Warning Behavior
Gold	0-2	Warns before modification
Silver	3-10	Normal operation
Bronze	11-20	Churn velocity alerts
Red	21+	Excessive churn warnings

Churn CLI Commands

# Show churn stats for a file
afterimage churn src/app.py

# Show function-level details
afterimage churn src/app.py --functions

# Show edit history
afterimage churn src/app.py --history

# List hotspots (most churned files)
afterimage hotspots --limit 10

# List files by tier
afterimage files --tier gold
afterimage files --tier red

Warning Examples

Gold Tier Warning:

File: src/core/auth.py
Tier: GOLD (Stable - rarely changed)

This file is stable and rarely modified.
  - Total edits: 2
  - Last edit: 2026-01-01T10:30:00

Are you sure this change is necessary?
Retry your write if intentional.

Repetitive Function Warning:

File: src/handlers/api.py
Function: process_request()

This function has been modified 4 times in the last 24 hours.

Possible issues:
  - Bug not fully fixed
  - Requirements unclear
  - Function needs redesign

Consider stepping back to understand the root cause.

Quick Start

Step 1: Install

pip install ai-afterimage

Step 2: Setup

afterimage setup

This automatically:

• Creates ~/.afterimage/ configuration
• Installs the hook to ~/.claude/hooks/
• Configures ~/.claude/settings.json
• Downloads the embedding model (~90MB)

Step 3: Done

Start Claude Code. AfterImage now works invisibly in the background:

• Before writes: Shows similar past code (if found)
• After writes: Stores the code for future recall

Verify It's Working

afterimage stats    # Check KB statistics
afterimage search "authentication"  # Search your code memory
afterimage recent   # See recent stored entries

Requirements

• Python 3.10+
• Claude Code CLI
• Linux or macOS (Windows support planned)

---

Installation Options

From PyPI (Recommended)

# Basic install (SQLite backend - works out of the box)
pip install ai-afterimage

# With PostgreSQL support (for multi-user/concurrent access)
pip install ai-afterimage[postgresql]

PostgreSQL Backend (Optional)

If you want concurrent access (multiple Claude sessions) or shared team memory:

# 1. Install PostgreSQL and pgvector
# Ubuntu/Debian:
sudo apt install postgresql postgresql-contrib
# Then install pgvector extension (see https://github.com/pgvector/pgvector)

# 2. Create database
sudo -u postgres psql -c "CREATE USER afterimage WITH PASSWORD 'yourpassword';"
sudo -u postgres psql -c "CREATE DATABASE afterimage OWNER afterimage;"
sudo -u postgres psql -d afterimage -c "CREATE EXTENSION vector;"

# 3. Install with PostgreSQL support
pip install ai-afterimage[postgresql]

# 4. Set password environment variable (REQUIRED for PostgreSQL)
export AFTERIMAGE_PG_PASSWORD=yourpassword

# Add to shell config for persistence
echo 'export AFTERIMAGE_PG_PASSWORD=yourpassword' >> ~/.bashrc

# 5. Update config to use PostgreSQL backend
# Edit ~/.afterimage/config.yaml and add:
#   storage:
#     backend: postgresql

Important: The AFTERIMAGE_PG_PASSWORD environment variable must be set before running any afterimage commands when using PostgreSQL. Without it, authentication will fail.

See the PostgreSQL Backend section below for full configuration options.

From Source

git clone https://github.com/DragonShadows1978/AI-AfterImage.git
cd AI-AfterImage
pip install -e ".[embeddings]"

---

Ingest Existing Transcripts (Optional)

If you have existing Claude Code transcripts:

# Ingest all transcripts from default location
afterimage ingest

# Or from a specific directory
afterimage ingest -d /path/to/transcripts

# With verbose output
afterimage ingest -v

4. Search Your Memory

# Search for code you've written before
afterimage search "authentication middleware"

# Filter by file path
afterimage search "validate" --path validators

# Output as JSON
afterimage search "database connection" --json

PostgreSQL Backend (Optional)

For better concurrent access and vector search performance, AfterImage v0.2.0+ supports PostgreSQL with pgvector as an alternative to SQLite.

Why PostgreSQL?

Feature	SQLite	PostgreSQL
Setup	Zero-config	Requires installation
Concurrent writes	Limited	Excellent
Vector search	Approximate (brute force)	Native pgvector with IVFFlat
Multi-user	Single user	Multi-user capable
Large datasets	Works well to ~100K entries	Scales to millions
Network access	Local only	Network capable

Recommendation: Start with SQLite (default). Switch to PostgreSQL if you need concurrent access from multiple Claude Code sessions or have a large code history.

PostgreSQL Setup

1. Install PostgreSQL and pgvector

# Ubuntu/Debian
sudo apt install postgresql postgresql-contrib

# Install pgvector extension
sudo apt install postgresql-server-dev-all
git clone https://github.com/pgvector/pgvector.git
cd pgvector && make && sudo make install

2. Create the Database

# Create user and database
sudo -u postgres psql <<EOF
CREATE USER afterimage WITH PASSWORD 'your_secure_password';
CREATE DATABASE afterimage OWNER afterimage;
\c afterimage
CREATE EXTENSION vector;
EOF

3. Install Python Dependencies

# With package
pip install -e ".[postgresql]"

# Or manually
pip install asyncpg psycopg[binary] pgvector

4. Configure AfterImage

Edit ~/.afterimage/config.yaml:

storage:
  backend: postgresql

  sqlite:
    path: ~/.afterimage/memory.db  # Fallback location

  postgresql:
    host: localhost
    port: 5432
    database: afterimage
    user: afterimage
    # Password via environment variable (recommended)
    # Or set here: password: your_secure_password
    min_pool_size: 2
    max_pool_size: 10

# Other settings remain the same
search:
  max_results: 5
  relevance_threshold: 0.6

embeddings:
  model: all-MiniLM-L6-v2
  device: cpu  # or cuda

Environment Variables

Set the PostgreSQL password via environment variable (recommended over storing in config):

# Add to ~/.bashrc or ~/.zshrc
export AFTERIMAGE_PG_PASSWORD=your_secure_password

# Optional: Override backend from config
export AFTERIMAGE_BACKEND=postgresql

Variable	Description
AFTERIMAGE_BACKEND	Override backend: sqlite or postgresql
AFTERIMAGE_PG_PASSWORD	PostgreSQL password
AFTERIMAGE_PG_HOST	PostgreSQL host
AFTERIMAGE_PG_PORT	PostgreSQL port
AFTERIMAGE_PG_DATABASE	Database name
AFTERIMAGE_PG_USER	Database user
AFTERIMAGE_DATABASE_URL	Full connection string (overrides individual params)

Migrating from SQLite to PostgreSQL

If you have existing code memories in SQLite, migrate them to PostgreSQL:

# Migrate all entries
afterimage migrate --sqlite ~/.afterimage/memory.db --postgresql

# Validate migration
afterimage stats --backend postgresql

# Verify entry counts match
afterimage stats --backend sqlite

The migration:

• Copies all entries with embeddings preserved
• Supports resumable migration (skips existing entries)
• Validates embedding integrity

Graceful Fallback

The hook automatically falls back to SQLite if PostgreSQL is unavailable:

1. PostgreSQL server unreachable
2. psycopg package not installed
3. Authentication failure
4. Database doesn't exist

You'll see in stderr: [AfterImage] PostgreSQL unavailable (...), falling back to SQLite

This ensures your code memory continues working even if PostgreSQL has issues.

CLI Commands

Command	Description
afterimage search <query>	Search the knowledge base
afterimage ingest	Ingest transcripts into KB
afterimage stats	Show KB statistics
afterimage recent	Show recent entries
afterimage export	Export KB to JSON
afterimage clear	Clear the knowledge base
afterimage config	Show/create configuration

Search Options

afterimage search "query" [options]

Options:
  -l, --limit N          Maximum results (default: 5)
  -t, --threshold FLOAT  Minimum relevance (default: 0.3)
  -p, --path PATTERN     Filter by file path
  --json                 Output as JSON

Ingest Options

afterimage ingest [options]

Options:
  -f, --file PATH        Specific transcript file
  -d, --directory PATH   Directory to search
  --no-embeddings        Skip embedding generation
  -v, --verbose          Verbose output

Architecture

AI-AfterImage/
+-- afterimage/
|   +-- __init__.py
|   +-- kb.py              # Knowledge base (SQLite + FTS5)
|   +-- filter.py          # Code vs artifact filter
|   +-- embeddings.py      # Embedding generation (sentence-transformers)
|   +-- search.py          # Hybrid search (keyword + semantic)
|   +-- inject.py          # Context injection formatting
|   +-- extract.py         # Transcript parsing
|   +-- cli.py             # Command line interface
|   +-- language_detection/  # v0.5.0: Language detection
|   |   +-- detector.py      # Content-based language identification
|   |   +-- signatures.py    # Language patterns and confidence scoring
|   +-- ast_parser/          # v0.5.0: Tree-sitter AST parsing
|   |   +-- parser.py        # Parser factory
|   |   +-- python_parser.py
|   |   +-- javascript_parser.py
|   |   +-- rust_parser.py
|   |   +-- go_parser.py
|   |   +-- c_parser.py
|   +-- semantic_index/      # v0.5.0: IDE-like code intelligence
|       +-- semantic_index.py     # Main coordinator
|       +-- definition_resolver.py # Go-to-definition
|       +-- references_finder.py   # Find all references
|       +-- hover_provider.py      # Hover info
|       +-- symbol_table.py        # Per-file symbols
|       +-- call_graph.py          # Call relationships
|       +-- type_inference.py      # Basic type propagation
+-- hooks/
|   +-- README.md          # Hook installation guide
|   +-- afterimage_hook.py # Claude Code hook script
+-- docs/
|   +-- code_intelligence.md  # Code intelligence documentation
|   +-- semantic_chunking.md  # Semantic chunking documentation
|   +-- churn_tracking.md     # Churn tracking documentation
+-- tests/
+-- pyproject.toml
+-- README.md
+-- LICENSE

Core Components

Knowledge Base (kb.py)

SQLite database with FTS5 full-text search:

• Table: code_memory

  • id: Unique identifier
  • file_path: Where the code was written
  • old_code: Previous content (for Edit) or NULL (for Write)
  • new_code: The code that was written
  • context: Conversation context (why it was written)
  • timestamp: When it was written
  • session_id: Which Claude Code session
  • embedding: Vector embedding (BLOB)

• Location: ~/.afterimage/memory.db

Code Filter (filter.py)

Determines if a file is "code" vs artifacts:

• Code extensions: .py, .js, .ts, .jsx, .tsx, .rs, .go, .java, .c, .cpp, etc.
• Skip extensions: .md, .json, .yaml, .txt, .log, .env
• Skip paths: artifacts/, docs/, research/, node_modules/
• Content heuristics: Fallback for unknown extensions

Embedding System (embeddings.py)

Local embeddings using sentence-transformers:

• Model: all-MiniLM-L6-v2 (90MB)
• Runs locally: No API calls
• CUDA support: Uses GPU if available
• Cached: Embeddings cached in KB for fast retrieval

Hybrid Search (search.py)

Combines keyword and semantic search:

relevance = (fts_weight * fts_score) + (semantic_weight * semantic_score)

• FTS5: SQLite full-text search with BM25 scoring
• Semantic: Cosine similarity between embeddings
• Default weights: FTS 40%, Semantic 60%

Context Injection (inject.py)

Formats search results for Claude:

You have written similar code before (3 matches):

### Match 1 (src/validators.py)

```python
def validate_email(email):
    return '@' in email

Context: Added email validation for user signup

Relevance: 85%

### Hook System

The Claude Code hook integrates AfterImage into your workflow using a **deny-then-allow pattern** that ensures Claude actually sees relevant past code before writing.

#### How It Works

Claude attempts Write/Edit | v AfterImage hook fires | v Search KB for similar code | +----+----+ Found Not Found | | v v DENY Allow

• show (write context proceeds) | v Claude SEES the past code (deny reason shown to Claude!) | v Claude retries Write | v Hook recognizes retry (same content hash) | v ALLOW | v File created | v Post-hook stores code in KB

#### Pre-Write Hook (Deny-Then-Allow)

The key insight: Claude Code's hook system shows `permissionDecisionReason` to Claude when a hook returns `deny`. We use this to inject context:

1. **First attempt**: Hook searches KB, finds similar code
2. **DENY** with reason containing the code examples
3. Claude **sees** the past code (it's in the deny message!)
4. Claude **retries** the write (automatically or adjusted)
5. **Second attempt**: Hook recognizes the same content hash, **allows** it

This ensures Claude has seen relevant patterns before the file is actually written.

#### Post-Write Hook

After Claude successfully writes code:
1. Check if file is code (not markdown, JSON, etc.)
2. Generate embedding (optional, for semantic search)
3. Store in KB with session context

## Configuration

`~/.afterimage/config.yaml`:

```yaml
# Search settings
search:
  max_results: 5
  relevance_threshold: 0.6
  max_injection_tokens: 2000

# Filter settings
filter:
  code_extensions:
    - .py
    - .js
    - .ts
    - .jsx
    - .tsx
    - .rs
    - .go
    - .java
    - .c
    - .cpp
    - .h
    - .rb
    - .php
    - .swift
    - .kt
  skip_extensions:
    - .md
    - .json
    - .yaml
    - .yml
    - .txt
    - .log
    - .env
  skip_paths:
    - artifacts/
    - docs/
    - research/
    - test_data/
    - __pycache__/
    - node_modules/

# Embedding model
embeddings:
  model: all-MiniLM-L6-v2
  device: cpu  # or cuda

Offline Mode

AfterImage is designed to work completely offline after the initial setup. This ensures your code memory is always accessible, even without internet.

Initial Setup (Requires Network)

On first use with embeddings enabled, the sentence-transformers model (~90MB) is downloaded and cached:

# First use downloads the model to ~/.afterimage/models/
afterimage search "test"  # Downloads all-MiniLM-L6-v2

Fully Offline After Setup

After the model is cached, all operations work offline:

• SQLite database - Local file storage, no network
• FTS5 search - Built into SQLite, no network
• Embeddings - Model loaded from local cache
• Configuration - Local YAML files only

What's Cached

Component	Location	Size
Knowledge Base	~/.afterimage/memory.db	Varies
Embedding Model	~/.afterimage/models/	~90MB
Configuration	~/.afterimage/config.yaml	<1KB

Verifying Offline Readiness

# Check if model is cached
ls ~/.afterimage/models/models--sentence-transformers--all-MiniLM-L6-v2

# Test offline search (disconnect network first to verify)
afterimage search "function"

Performance

Operation	Target	Typical
Model load	<5s	2-3s
Embedding generation	<50ms	20-30ms
Hybrid search	<100ms	30-50ms
FTS search only	<10ms	2-5ms

Development

Running Tests

# Install dev dependencies
pip install -e ".[dev]"

# Run all tests
pytest

# Run with coverage
pytest --cov=afterimage

# Run specific test file
pytest tests/test_inject.py

# Run slow tests (with embeddings)
pytest -m slow

Test Coverage

The test suite covers:

• Knowledge Base operations
• Code filtering logic
• Transcript extraction
• Search functionality
• Context injection formatting
• End-to-end integration
• Hook script handling

License

MIT License - See LICENSE for details.

Status

Working implementation - Core functionality complete:

• Knowledge Base with FTS5
• Code filtering
• Transcript extraction
• Embedding generation
• Hybrid search
• Context injection
• CLI commands
• Claude Code hooks
• Test suite (233/234 tests, 95.3% pass rate)
• Offline mode (works without network after model download)
• v0.2.0: PostgreSQL backend with pgvector (optional)
• v0.2.0: Graceful fallback from PostgreSQL to SQLite
• v0.2.0: Environment variable configuration
• v0.4.0: Config enhancement for PostgreSQL password fallback from ~/.bashrc
• v0.5.0: Code Intelligence (language detection, AST parsing, semantic index)
• v0.6.0: Codex transcript support (session_meta, apply_patch, multi-format)

Roadmap

Planned features for upcoming releases:

• Background Embedding Daemon - Async embedding generation service with systemd/launchd integration, GPU acceleration, and progress monitoring
• Semantic Code Chunking (v0.3.0) - Break code into meaningful units (functions, classes, blocks) instead of raw files for more precise context injection
• Churn Tracking (v0.3.0) - Detect repeatedly modified code, distinguish iteration from bug-chasing, surface stability metrics
• Code Intelligence (v0.5.0) - Language detection, tree-sitter AST parsing, semantic index with go-to-definition and find-references
• Code Pattern Clustering - Automatic grouping of related code using HDBSCAN, with 2D/3D visualization via UMAP
• Search Quality Improvements - Embedding validation, relevance feedback loop, drift detection
• VS Code Support - MCP server architecture for VS Code Claude extension compatibility

Contributing

Contributions welcome! Please:

1. Fork the repository
2. Create a feature branch
3. Add tests for new functionality
4. Submit a pull request

Related Projects

• AI-AtlasForge - Autonomous AI research and development platform. Run multi-day missions, accumulate cross-session knowledge, and build software autonomously. AfterImage provides the code memory that persists across AtlasForge missions.

Name

AI = After Image

The ghost of what was written, persisting across sessions.