Performs validity check of ancientMetagenomeDir datasets

Project description

AncientMetagenomeDirCheck

A python package to check AncientMetagenomeDir.

AncientMetagenomeDirCheck will verify a dataset, in tabular format, against a json schema.

Install

From PyPI using pip

pip install ancientMetagenomeDirCheck

The latest development version, directly from GitHub

pip install --upgrade --force-reinstall git+https://github.com/SPAAM-workshop/AncientMetagenomeDirCheck.git

Documentation

$ ancientMetagenomeDirCheck --help
Usage: ancientMetagenomeDirCheck [OPTIONS] DATASET SCHEMA

  ancientMetagenomeDirCheck: Performs validity check of ancientMetagenomeDir datasets
  Author: Maxime Borry
  Contact: <borry[at]shh.mpg.de>
  Homepage & Documentation: github.com/maxibor/ancientMetagenomeDirCheck

  DATASET: path to tsv file of dataset to check
  SCHEMA: path to JSON schema file

Options:
  --version  Show the version and exit.
  --help     Show this message and exit.

Project details

Release history Release notifications | RSS feed

1.3

Nov 5, 2021

1.2.1

Jan 18, 2021

1.2

Sep 3, 2020

1.1

Sep 2, 2020

This version

1.1.dev0 pre-release

Sep 2, 2020

1.0

Aug 27, 2020

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