8 projects
AMDirT
AMDirT: AncientMetagenomeDir Toolkit
comp_dnds
Efficiently computing dN/dS according to the NJ86 method
corecomb
sam2lca
Lowest Common Ancestor on SAM/BAM/CRAM alignment files
pydamage
Damage parameter estimation for ancient DNA
bamAlignCleaner
Removes unaligned references in BAM alignment file
ancientMetagenomeDirCheck
Performs validity check of ancientMetagenomeDir datasets
sourcepredict
Classification and prediction of the origin of metagenomic samples