Skip to main content

No project description provided

Project description

ANCOMBCviz

ANCOMBCviz is a Python package for analyzing differential abundance of group by microbiome composition and visualizing the resulting ANCOM-BC as a plot.

Method

In ANCOM-BC, program of analysis to diffrential abundance. This tool use compositional microbiome relative abundance data analysis. and This method also use LefSe2, ALDEx2 usually. In ANCOMBCviz, this ANCOM-BC results file make image file. plot type is barplot, heatmap. This package also need numpy >= 2.0, pandas, matplotlib >= 0.7.1, seaborn, skbio.stats.composition.ancom.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

ancombcviz-0.0.1.tar.gz (1.8 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

ancombcviz-0.0.1-py3-none-any.whl (2.5 kB view details)

Uploaded Python 3

File details

Details for the file ancombcviz-0.0.1.tar.gz.

File metadata

  • Download URL: ancombcviz-0.0.1.tar.gz
  • Upload date:
  • Size: 1.8 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.2.0 CPython/3.11.13

File hashes

Hashes for ancombcviz-0.0.1.tar.gz
Algorithm Hash digest
SHA256 b81c1ab3ece97bc4e2f44348dfdc73e14997664576ac13b0874c1986008290e2
MD5 684f059920161612c7b6e82e2b1596ce
BLAKE2b-256 ccf4c59f8fa4e8c6880c6111fa3345dc7b732dc56b65e63ea1b1be84c7295beb

See more details on using hashes here.

File details

Details for the file ancombcviz-0.0.1-py3-none-any.whl.

File metadata

  • Download URL: ancombcviz-0.0.1-py3-none-any.whl
  • Upload date:
  • Size: 2.5 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/6.2.0 CPython/3.11.13

File hashes

Hashes for ancombcviz-0.0.1-py3-none-any.whl
Algorithm Hash digest
SHA256 36dc47fbbf6ef0491410660c1a62a1ee5064a2b4b8139a22389bb0efb84bf124
MD5 fc5d2d5c1fbf591cc4fbf29bcb4a71f1
BLAKE2b-256 4e65568389266c0508fea2694c22914c6bc515482d1f5f01dabf76d04b78c288

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page