No project description provided
Project description
ANCOMBCviz
ANCOMBCviz is a Python package for analyzing differential abundance of group by microbiome composition and visualizing the resulting ANCOM-BC as a plot.
Method
In ANCOM-BC, program of analysis to diffrential abundance. This tool use compositional microbiome relative abundance data analysis. and This method also use LefSe2, ALDEx2 usually.
In ANCOMBCviz, this ANCOM-BC results file make image file. plot type is barplot, heatmap.
This package also need numpy >= 2.0, pandas, matplotlib >= 0.7.1, seaborn, skbio.stats.composition.ancom.
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file ancombcviz-0.0.1.tar.gz.
File metadata
- Download URL: ancombcviz-0.0.1.tar.gz
- Upload date:
- Size: 1.8 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.2.0 CPython/3.11.13
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
b81c1ab3ece97bc4e2f44348dfdc73e14997664576ac13b0874c1986008290e2
|
|
| MD5 |
684f059920161612c7b6e82e2b1596ce
|
|
| BLAKE2b-256 |
ccf4c59f8fa4e8c6880c6111fa3345dc7b732dc56b65e63ea1b1be84c7295beb
|
File details
Details for the file ancombcviz-0.0.1-py3-none-any.whl.
File metadata
- Download URL: ancombcviz-0.0.1-py3-none-any.whl
- Upload date:
- Size: 2.5 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.2.0 CPython/3.11.13
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
36dc47fbbf6ef0491410660c1a62a1ee5064a2b4b8139a22389bb0efb84bf124
|
|
| MD5 |
fc5d2d5c1fbf591cc4fbf29bcb4a71f1
|
|
| BLAKE2b-256 |
4e65568389266c0508fea2694c22914c6bc515482d1f5f01dabf76d04b78c288
|