Set of scripts to aid Arx administrators import data
Project description
Arx Tools
A set of scripts that helps to import genome data into the Arx folder structure.
Quick Start
# Install
pip install arx-tools
# Initialize folder structure
export FOLDER_STRUCTURE=/path/to/folder_structure
init_folder_structure
# Import genome data
import_genome --import_dir=/path/to/genome/data --organism STRAIN --genome STRAIN.1
Documentation
📖 Documentation: docs.abrinca.com/tools
Help
All scripts have built-in help functions:
import_genome --help
Requirements
- Python 3.9 or higher
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