ase-calculator-kit
A thin, unified ASE calculator factory for
machine-learning interatomic potentials and DFT calculators. Every call
returns a standard ase.Calculator, so the rest of your ASE workflow stays
unchanged.
Supported MLIP backends:
- SevenNet
- CHGNet
- MatGL (PyG): TensorNet and provisional CHGNet MatPES potentials
- MatterSim
- NequIP OAM
- OrbMol (orb-models): OrbMol-v2, a molecular potential with learnable electrostatics — installs from wheels only on Python 3.12, see OrbMol (orb-models)
- UMA / fairchem
- eSEN OMol25 (
esen): conserving and direct-force checkpoints through fairchem - MACE — must be installed in a separate virtual environment, see MACE needs its own environment
Supported DFT backends:
- VASP
- Quantum ESPRESSO (
qe,espresso,quantum-espresso) - Molecular PySCF (
pyscf) and GPU4PySCF (gpu4pyscf): HF/DFT energy and forces, VV10, D3/D4, ECP, SMD/PCM; see configuration
Install
pip install ase-calculator-kit
The default installation is intentionally lightweight: it pulls in ASE and PyYAML and no NNP backend, so it does not drag in torch. Each backend is an explicit extra — install only what your workflow needs:
# One backend
pip install "ase-calculator-kit[sevennet]"
pip install "ase-calculator-kit[chgnet]"
pip install "ase-calculator-kit[matgl]" # TensorNet and provisional MatGL CHGNet
pip install "ase-calculator-kit[mattersim]"
pip install "ase-calculator-kit[nequip]"
pip install "ase-calculator-kit[orb]" # Python 3.12; see the note below
pip install "ase-calculator-kit[uma]"
pip install "ase-calculator-kit[esen]" # same fairchem dependency
# Several selected backends
pip install "ase-calculator-kit[chgnet,mattersim]"
# Every co-installable NNP backend and the optional D3 correction
pip install "ase-calculator-kit[all]"
# D3 correction without installing every NNP backend
pip install "ase-calculator-kit[dispersion]"
⚠️ MACE is the one exception: it needs a virtual environment of its own.
mace-torchpinse3nn==0.4.4, whilesevenn,fairchem-core,mattersimandnequipall requiree3nn>=0.5. There is no resolution that satisfies both, somaceis not part of[all], andpip install "ase-calculator-kit[all,mace]"cannot succeed.python -m venv .venv-mace .venv-mace/bin/pip install "ase-calculator-kit[mace]"
⚠️
orbis also outside[all], for an unrelated reason. It co-installs with every other backend, butorb-modelspinsdm-tree==0.1.8, whose newest wheels are cp312 — so on Python 3.13 and 3.14 the install stops in a source build. Putting it in[all]would take[all]down with it. The model itself runs fine on 3.13; see OrbMol (orb-models) for the one-line override.
Missing backend packages are reported only when that calculator is requested, with the matching extra to install.
Python versions
Python 3.12 and newer. The package itself has no upper bound; backend compatibility is checked separately:
| 3.12 | 3.13 | 3.14 | |
|---|---|---|---|
Core, all, and MLIP extras except orb |
✅ | ✅ | ✅ |
pyscf, pyscf-dispersion (Linux) |
✅ | ✅ | ✅ |
gpu4pyscf-cuda12x (Linux x86_64) |
✅ | ✅ | ❌ |
orb |
✅ | ⚠️ override | ⚠️ override |
For orb, the cause is one line of
upstream metadata rather than the model: orb-models pins dm-tree==0.1.8,
whose newest wheels are cp312. OrbMol-v2 itself runs on 3.13 — verified against
the 3.12 results, to the last digit — once dm-tree is allowed to be newer.
OrbMol (orb-models) has the command.
The molecular GPU extra uses a validated CuPy version without cp314 wheels.
uma (and therefore all) used to be
❌ on 3.14, because fairchem-core declared requires-python = ">=3.11,<3.14"
and pinned torch~=2.8.0, which has no cp314 wheels; fairchem-core 2.22.0 —
the floor this release requires — lifted the cap and moved to torch~=2.13.0.
A backend that lags a Python release is left to cap itself rather than hidden behind an environment marker: pip then names the backend in the error, while a marker would make the install succeed and silently leave the backend out.
Use this import for new code:
from ase_calculator_kit import get_calculator
Usage
MLIP calculators keep the lightweight keyword API:
from ase.build import bulk
from ase_calculator_kit import get_calculator
atoms = bulk("Cu", "fcc", a=3.6)
atoms.calc = get_calculator("sevennet", model="7net-omni", modal="mpa")
print(atoms.get_potential_energy())
atoms.calc = get_calculator("chgnet", device="mps")
print(atoms.get_potential_energy())
atoms.calc = get_calculator("mattersim", model="5M")
print(atoms.get_potential_energy())
atoms.calc = get_calculator("nequip", model="L")
print(atoms.get_potential_energy())
atoms.calc = get_calculator("uma", model="uma-s-1p2p1", task="omat")
print(atoms.get_potential_energy())
OrbMol-v2 is a molecular model, so it takes a molecule and needs the system's total charge and spin multiplicity:
from ase.build import molecule
mol = molecule("H2O")
mol.info["charge"] = 0
mol.info["spin"] = 1
mol.calc = get_calculator("orb")
print(mol.get_potential_energy())
In the separate MACE environment, the same call shape applies:
atoms.calc = get_calculator("mace", model="mh-1", head="omat_pbe")
print(atoms.get_potential_energy())
DFT calculators are config-only:
from ase_calculator_kit import get_calculator
atoms.calc = get_calculator("vasp", config="examples/dft/vasp_pbe_static.yaml")
atoms.calc = get_calculator("qe", config="examples/dft/qe_pbe_static.yaml")
For VASP and QE, arbitrary keyword arguments are intentionally rejected to keep calculation conditions explicit and reproducible:
get_calculator("vasp", encut=520) # TypeError
For reproducibility, VASP configs must explicitly specify profile.command
(QE additionally requires profile.pseudo_dir and pseudopotentials);
environment-variable-only execution is intentionally not used by this wrapper.
Use overrides= for small dynamic changes:
atoms.calc = get_calculator(
"vasp",
config="examples/dft/vasp_pbe_static.yaml",
overrides={"directory": "runs/vasp/Cu_001"},
)
Write the final merged config for auditability:
atoms.calc = get_calculator(
"qe",
config="examples/dft/qe_pbe_static.yaml",
overrides={"directory": "runs/qe/Cu_001"},
write_resolved_config=True,
)
API Reference
Calculator names
get_calculator(name, **kwargs) takes one of these names (case-insensitive);
available_calculators() returns the same list at runtime.
name |
Kind | Aliases |
|---|---|---|
sevennet |
MLIP | — |
chgnet |
MLIP | — |
tensornet |
MLIP (MatGL PyG) | — |
matgl-chgnet |
MLIP (MatGL PyG; provisional gradient correction) | — |
mattersim |
MLIP | — |
nequip |
MLIP | — |
orb |
MLIP (OrbMol-v2; Python 3.12) | — |
mace |
MLIP (separate environment) | — |
uma |
MLIP | fairchem |
esen |
MLIP (OMol25) | — |
vasp |
DFT | — |
qe |
DFT | espresso, quantum-espresso |
pyscf |
Molecular HF/DFT (CPU) | — |
gpu4pyscf |
Molecular HF/DFT (CUDA) | — |
An unknown name raises ValueError listing the valid names.
MLIP keyword arguments
All MLIP backends accept device= ("auto" by default; see
Apple Silicon (MPS) support), dispersion=False,
dispersion_xc=None, dispersion_damping=None, dispersion_cutoff=None,
dispersion_cutoff_smoothing=None (see Dispersion), and forward
any extra keywords to the underlying calculator.
name |
Backend-specific keywords (defaults) |
|---|---|
sevennet |
model="7net-omni", modal="auto", enable_cueq=False, enable_flash=False |
chgnet |
model=None (bundled default), checkpoint=None (path to a .pth) |
tensornet |
model="matpes-pbe" (or "matpes-r2scan"), revision=None (Hugging Face commit) |
matgl-chgnet |
same model selectors; revision=None selects the frozen benchmark revision |
mattersim |
model="1M" (or "5M"), load_path=None |
nequip |
model="L" (S/M/L/XL), model_path=None, compile_mode="eager", neighborlist_backend="matscipy", allow_tf32=False |
orb |
model="orbmol-v2", precision="float32-high", compile=None |
mace |
model="mh-1", head="auto", default_dtype="float64", accelerator="auto" |
uma |
model="uma-s-1p2p1", task="omat", inference_settings="default" |
DFT keyword arguments
DFT backends accept only these three; anything else raises TypeError.
| Keyword | Default | Meaning |
|---|---|---|
config |
required | YAML path or dict of calculation conditions |
overrides |
None |
dict deep-merged over config |
write_resolved_config |
False |
Write the merged config into the run directory |
Public helpers
from ase_calculator_kit import (
attach_calculator,
available_calculators,
available_dft_calculators,
available_mlip_models,
available_models,
get_dft_calculator,
get_mlip_calculator,
resolve_calculator_config,
)
available_mlip_models() # ['chgnet', 'fairchem', 'mace', 'matgl-chgnet', 'mattersim', 'nequip', 'orb', 'sevennet', 'tensornet', 'uma']
available_dft_calculators() # ['espresso', 'qe', 'quantum-espresso', 'vasp']
available_calculators() # both of the above; available_models() is an alias
attach_calculator(atoms, "uma", task="omat") # sets atoms.calc, returns atoms
Exceptions
from ase_calculator_kit import CalculatorKitError, DispersionError, MissingDependencyError
| Exception | Also a | Raised when |
|---|---|---|
CalculatorKitError |
Exception |
Base class for everything below |
MissingDependencyError |
ImportError |
The backend package is not installed; the message names the extra to install |
DispersionError |
ValueError |
dispersion=True is not allowed for that model (see Dispersion) |
ValueError |
— | Unknown calculator name, unsupported device, or an incomplete DFT config |
TypeError |
— | A DFT backend was given a keyword other than the three above, or config= was omitted |
Examples
Run a CPU single point with every MLIP model/variant:
python examples/run_all_models.py
python examples/run_all_models.py --device auto
python examples/run_all_models.py --only chgnet sevennet nequip
Create DFT calculator objects from YAML without running VASP/QE:
python examples/dft/create_dft_calculator_from_config.py vasp \
examples/dft/vasp_pbe_static.yaml
DFT YAML examples live in examples/dft.
Apple Silicon (MPS) support
Every MLIP backend was run on a single point (bulk("Cu")) with device="mps"
on Apple Silicon Macs (arm64, MPS available). MatGL models use the environment
recorded in their validation report below. Results:
| Backend | device="mps" |
Notes |
|---|---|---|
| SevenNet | ✅ supported | validated locally (7net-omni) |
| CHGNet | ✅ supported | validated locally |
| MatGL TensorNet | ✅ supported | both MatPES checkpoints; MPS uses float32, D3 runs on CPU; see the validation record |
| MatGL CHGNet (provisional) | ✅ supported | both corrected MatPES checkpoints; MPS uses float32, D3 runs on CPU; see the validation record |
| MatterSim | ✅ supported | validated locally |
| NequIP OAM | ❌ not supported | PyTorch MPS lacks float64; the packaged OAM models use float64 buffers |
| OrbMol | ❌ not supported | graph construction runs through NVIDIA Warp, which has no Metal backend; the legacy edge methods need float64 or refuse a non-CPU device |
| MACE | ❌ not supported | same float64 problem: loading mace-mh-1.model with map_location="mps" raises Cannot convert a MPS Tensor to float64, with default_dtype="float32" as well |
| UMA / fairchem | ❌ not supported | fairchem-core asserts device in {"cpu", "cuda"} |
For the MPS-supported backends, device="auto" resolves to mps on Apple
Silicon when no CUDA device is present. NequIP, OrbMol, MACE and UMA accept only
"cpu" / "cuda"; passing device="mps" raises a clear ValueError, and
device="auto" falls back to cpu.
Choosing an MLIP Variant
MatGL PyG MatPES models
Install ase-calculator-kit[matgl], or [matgl,dispersion] to add D3. The
[all] extra includes both. MatGL 4.0.3 or newer (within 4.x) uses PyG only;
DGL is not installed or selected. The native chgnet extra remains independent.
atoms.calc = get_calculator("tensornet", model="matpes-pbe", device="mps")
atoms.calc = get_calculator("tensornet", model="matpes-r2scan", dispersion=True)
name |
Short model |
Official model name |
|---|---|---|
tensornet |
matpes-pbe (default) |
TensorNet-PES-MatPES-PBE-2025.2 |
tensornet |
matpes-r2scan |
TensorNet-PES-MatPES-r2SCAN-2025.2 |
matgl-chgnet |
matpes-pbe (default) |
CHGNet-PES-MatPES-PBE-2025.2.10 |
matgl-chgnet |
matpes-r2scan |
CHGNet-PES-MatPES-r2SCAN-2025.2.10 |
The full model names and dated suffixes such as
model="pes-matpes-pbe-2025.2" are also accepted, case-insensitively.
An unknown version or a name belonging to a different architecture is rejected
before downloading. Short names always map to the dated names above.
The weights come from the official
materialyze organization; pass
revision="<Hugging Face commit SHA>" to freeze a specific weight revision.
Upstream has replaced weights under existing dated names, so record the revision
as well as the model name for reproducible comparisons.
matgl-chgnet is a temporary compatibility backend requiring exactly MatGL
4.0.3. It uses the existing 2025.2.10 weights, with only the no_grad() block
around three-body geometry removed on the loaded model instance. These are
not retrained checkpoints. This restores consistency between energy and
its force/stress derivatives; it does not guarantee better accuracy for every
property or dataset. The original chgnet backend uses the Ceder CHGNet package.
pip install "ase-calculator-kit[matgl,dispersion]" "matgl==4.0.3"
atoms.calc = get_calculator("matgl-chgnet", model="matpes-pbe", device="mps")
atoms.calc = get_calculator("matgl-chgnet", model="matpes-r2scan", dispersion=True)
By default, provisional CHGNet weights are frozen to HF revisions
4ec3c2c323cde07a31ca99d6719cca45919b5e5f (PBE) and
4447783f53387df4642d13062cafc9571f1668d2 (r2SCAN); an explicit revision=
overrides this choice. The resolved model/revision and correction are recorded
in the underlying PESCalculator's parameters. With D3 this is
calc.mixer.calcs[0].parameters. Unrecognized MatGL source or versions fail
before downloading instead of receiving an unverified patch.
Once upstream retrained models are released and validated, a future kit release will replace this provisional implementation and document the new weights and behavior. No automatic weight replacement occurs in this release. For reproducibility, record the kit/MatGL versions and HF revision. See the validation record and upstream fix #835. MatGL M3GNet remains deferred.
dispersion=True selects D3 parameters xc="pbe" or xc="r2scan" from the
resolved model. The shared defaults remain BJ damping, 14 Å cutoff and poly
smoothing. When the network runs on MPS, the D3 term runs on CPU.
The calculator returns total-cell energy in eV, forces in eV/Å with shape
(N, 3), and stress in eV/ų with shape (6,), ordered
xx, yy, zz, yz, xz, xy. MatGL's GPa default is explicitly changed through its
own API; incompatible stress_unit, stress_weight or use_voigt overrides
are rejected. TensorNet's float64 buffers are cast to float32 before moving to
MPS. No global PyTorch dtype or graph backend setting is changed.
Both MatGL backends honor each axis of atoms.pbc: bulk [True, True, True],
slabs such as [True, True, False], wires and nonperiodic molecules. An input
adapter corrects MatGL 4.0.3's handling of partial PBC, including with D3;
the supplied atoms are not modified. Missing nonperiodic cell vectors are
allowed for energy/forces. Stress requires three independent cell vectors;
otherwise ASE raises PropertyNotImplementedError. With a vacuum cell, stress
uses the full cell volume, as in ASE. Fully nonperiodic torch-dftd calculations
provide energy/forces only, so stress is unavailable with D3 in that case.
Previously computed partial-PBC MatGL results need recomputation. Full-PBC
graph construction remains unchanged.
See the validation record for the common-system checks against SevenNet-Omni, finite differences and measured CPU/MPS agreement.
SevenNet model
model |
Fidelity | Use for |
|---|---|---|
7net-omni (default) |
multi | Recommended general model |
7net-omni-i8 |
multi | Larger capacity: more accurate, slower |
7net-omni-i12 |
multi | Largest of the family |
7net-mf-ompa |
multi | MPtrj + sAlex + OMat24 multi-fidelity |
7net-omat |
single | OMat24 only, PBE(+U) — SevenNet-omat |
7net-l3i5, 7net-0 |
single | Earlier models |
atoms.calc = get_calculator("sevennet", model="7net-omni-i12") # modal="mpa"
atoms.calc = get_calculator("sevennet", model="7net-omat") # no modal
The Omni family is one training recipe at three capacities, so the modal table
below applies unchanged to all three. Keep the model fixed across a campaign —
i8 and i12 are separate models, not refinements of an 7net-omni number, so
energies are not comparable between them.
Multi- vs single-fidelity is handled for you. modal defaults to "auto",
which sends mpa to a multi-fidelity model and nothing at all to a
single-fidelity one, so model="7net-omat" needs no second argument. Passing an
explicit modal to a single-fidelity model now raises: sevenn only warns and
drops it, and the dropped modal was still being used to pick the D3 functional —
model="7net-0", modal="matpes_r2scan" used to apply r2SCAN dispersion
parameters to a PBE model.
SevenNet modal
modal |
Use for | Reference level |
|---|---|---|
mpa (default) |
General-purpose, including molecules | PBE(+U) |
omat24 |
Broad / high-force configurations | PBE(+U) |
matpes_pbe |
PBE without Hubbard U | PBE |
matpes_r2scan |
r2SCAN-level materials | r2SCAN |
mp_r2scan |
r2SCAN-level Materials Project data | r2SCAN |
oc20 |
Catalyst surfaces and adsorption | RPBE |
oc22 |
Oxide catalysis | PBE(+U) |
odac23 |
MOFs / direct air capture | PBE-D3 |
omol25_low |
Low-spin molecular systems | ωB97M-V |
omol25_high |
High-spin molecular systems only | ωB97M-V |
spice |
Drug-like molecules and peptides | ωB97M-D3(BJ) |
qcml |
Small molecules, wide element coverage | PBE0 + MBD-NL |
pet_mad |
PBEsol-level data | PBEsol |
omol25_low and omol25_high split OMol25 by spin state, not by accuracy —
pick the one matching your system. SevenNet's own guidance is that mpa stays
the recommended default even for molecules, organic crystals, and molecular
liquids; choose another task only when you need consistency with a specific
functional or benchmark protocol.
Single-fidelity models such as 7net-0 do not take modal; pass modal=None.
NequIP OAM model
model |
Use for |
|---|---|
S |
Smallest OAM model for quick checks |
M |
Medium OAM model |
L (default) |
Recommended general OAM model for inorganic solids |
XL |
Largest OAM model when higher capacity is worth the cost |
NequIP OAM models are loaded through NequIP's nequip.net: loader and cached by
NequIP. To avoid a download, pass model_path="path/to/model.nequip.zip".
MatterSim model
1M (default) is for fast screening, 5M is more accurate. Keep the checkpoint
fixed across a campaign.
MACE model and head
model |
Heads | Trained on |
|---|---|---|
mh-1 (default) |
6, see below | Multi-head cross-learning |
omol-0 / MACE-OMOL-0 |
omol |
OMol25, ωB97M-V |
polar-1-s/m/l / MACE-POLAR-1 |
single | OMol25 with electrostatics; family name selects medium |
medium-omat-0 |
single | OMat24, PBE(+U) — MACE-OMAT-0 |
small-omat-0 |
single | OMat24, smaller |
medium-mpa-0 |
single | MPtrj + sAlex, PBE(+U) |
mace-matpes-pbe-0 |
single | MatPES, PBE |
mace-matpes-r2scan-0 |
single | MatPES, r2SCAN |
atoms.calc = get_calculator("mace") # mh-1 / omat_pbe
atoms.calc = get_calculator("mace", model="medium-omat-0") # no head needed
head defaults to "auto": omat_pbe for mh-1, the loader-owned omol head
for omol-0, and no head argument for the other single-head checkpoints above
(they carry one head named Default, and handing
them a head name from another model makes MACE quietly compute with the head it
does have). The omat-0 and matpes checkpoints are released under the ASL
license, not MIT — MACE prints a notice when it downloads one.
MACE-MH-1 is a single checkpoint with six readout heads. The head is the level of theory, not an accuracy setting: the same structure returns PBE, r2SCAN or ωB97M energies depending on which one you pick.
head |
Use for | Reference level |
|---|---|---|
omat_pbe (default) |
Inorganic materials; best cross-domain behaviour | PBE(+U) |
mp_pbe_refit_add |
Materials Project trajectories | PBE(+U) |
oc20_usemppbe |
Catalyst surfaces and adsorption | PBE (see below) |
matpes_r2scan |
r2SCAN-level materials | r2SCAN |
omol |
Molecules and organometallics | ωB97M-VV10 |
spice_wB97M |
Small to medium organic molecules | ωB97M-D3(BJ) |
atoms.calc = get_calculator("mace", head="matpes_r2scan")
Two things worth knowing before trusting a number from this model:
- An unknown head does not raise upstream. MACE logs a warning and computes
with the last head in the file, so a typo returns a plausible energy from the
wrong level of theory. This package rejects unknown heads with a
ValueErrorinstead, before the checkpoint is downloaded. The head names above are read back from the shippedmace-mh-1.model; the model card advertises anrgd1_b3lyphead that the published checkpoint does not carry. default_dtypedefaults to"float64", following the MH-1 model card — the right choice for geometry optimisation and phonons. Passdefault_dtype="float32"for faster MD.
OrbMol model
get_calculator("orb") loads OrbMol-v2, and that is the only checkpoint
this backend accepts (model="orbmol-v2", also spelled "orbmol_v2"). The rest
of orb-models' registry — the Orb-v3 OMat/MPA models, Orb-v2, OrbMol-v1 — is not
wired up: each is a different reference level and needs its own row in the
dispersion policy, so asking for one raises ValueError rather than quietly
computing at a level this package does not document.
OrbMol-v2 continues the Orb-v3 architecture with learnable electrostatics: a
latent-charge head predicts per-atom charges constrained to sum to the system's
total charge, and a Coulomb module adds the long-range term — a bare 1/r sum for
isolated systems, particle mesh Ewald for periodic ones. It is trained on OMol25
and OPoly26 at ωB97M-V/def2-TZVPD, the same reference level as UMA's omol task
and SevenNet's omol25_* modals, and unlike OrbMol-v1 it has seen periodic
systems.
from ase.build import molecule
from ase_calculator_kit import get_calculator
atoms = molecule("H2O")
atoms.info["charge"] = 0
atoms.info["spin"] = 1
atoms.calc = get_calculator("orb")
print(atoms.get_potential_energy())
| Keyword | Default | Meaning |
|---|---|---|
precision |
"float32-high" |
also "float32-highest" (same dtype, exact matmuls) or "float64" |
compile |
None |
None follows orb-models and compiles; False skips it |
- The first single point is the slow one, twice over. On a machine that has
never run orb-models, NVIDIA Warp compiles its neighbor-list kernels once —
about a minute and a half here, then cached under
~/.cache/warpand unrelated tocompile=. With those caches warm, measured on CPU:compile=Nonecosts ~7 s on the first call against ~1.4 s withcompile=False, and both settle at ~0.02 s per call afterwards. Compiling is worth it across a trajectory, not in a one-shot script. - Energy, forces and stress are all derivatives. OrbMol-v2 is conservative,
and orb-models turns the stress derivative on when preparing it for
inference.
calc.resultsalso carriesconfidence(the model's own uncertainty estimate),rotational_grad, andgrad_forces/grad_stressunder their upstream names. - A charged system in a periodic cell is not the isolated one. The periodic
Coulomb term is an Ewald sum against a neutralizing background, so acetate⁻
in a 14 Å box came out 1.45 eV below the same anion with
pbc=Falsehere. That is the Ewald convention doing its job, not a model error — but it meanspbc=Trueon a charged molecule answers a different question. Neutral molecules in the same box moved by under 3 meV. dispersion=Trueis refused: ωB97M-V already carries the nonlocal VV10 term.
UMA task
task |
Use for |
|---|---|
omat (default) |
Inorganic bulk/materials, stress, cell optimization |
omol |
Molecules and polymers |
oc20 |
Catalyst surfaces and adsorption |
oc22 |
Oxide catalysis |
oc25 |
Electrochemistry / solid-liquid interfaces |
odac |
MOFs and direct air capture |
omc |
Molecular crystals |
For the molecular task (omol), set atoms.info["charge"] and
atoms.info["spin"] before computing — see
Molecular systems for why this matters.
UMA inference_settings
inference_settings= chooses how the predict unit is built, which is where
UMA's speed/precision trade lives. It reaches fairchem's get_predict_unit(),
so it must be set when the calculator is created, not afterwards.
inference_settings |
TF32 | merge_mole |
compile |
Use for |
|---|---|---|---|---|
"default" |
✗ | ✅ | ✅ | MD and relaxation — one system, many steps |
"turbo" |
✅ | ✅ | ✅ | the same, trading a little precision for speed |
"batch" |
✗ | ✗ | ✗ | many different structures |
"traineval" |
✗ | ✗ | ✗ | reproducing fairchem's training/eval numbers |
atoms.calc = get_calculator("uma", task="omat") # MD
atoms.calc = get_calculator("uma", task="omat", inference_settings="turbo")
atoms.calc = get_calculator("uma", task="omat", inference_settings="batch")
Two things about this are easy to get backwards.
The default is already the MD fast path. Since fairchem-core 2.22,
"default" merges the MOLE experts and compiles the model; "turbo" is that
same path with TF32 switched on. So turbo is not what turns compilation on.
Measured on an H100 (MIG 4g.47gb), 27-atom fcc Cu, task="omat", twelve frames
of the same system, averaged over the last eight:
inference_settings |
first step | steady state | ΔE vs default |
ΔF rmse |
|---|---|---|---|---|
"default" |
59.4 s | 13.5 ms | — | — |
"turbo" |
48.2 s | 12.8 ms | 3.69 meV (0.137 meV/atom) | 0.0004 eV/Å |
"batch" |
0.38 s | 56.7 ms | 0.005 meV | 0.000001 eV/Å |
So on this hardware turbo bought about 5 %, and cost 0.137 meV/atom. That
error is the same size as the gap between two different models — OrbMol-v2 and
UMA differ by 0.08–0.8 meV/atom on small molecules — so turning it on by default
would put a numerical artefact where a model difference is supposed to be. It
stays opt-in here, as it does in fairchem. Turn it on when you are running one
model and want throughput; leave it off when the number is going into a
comparison. On CPU it does nothing at all.
The same table says merge_mole + compile is numerically honest: "batch",
which uses neither, lands within 0.005 meV of "default". The 4× per-step cost
is what you give up for skipping them.
TF32 is applied inside a context manager around UMA's own forward pass, which
restores torch.get_float32_matmul_precision() afterwards — so turbo does not
leak reduced precision into other calculators sharing the process.
merge_mole assumes the system never changes. Composition, task, total
charge and spin must all stay fixed — true of an MD trajectory, false of a loop
over structures. fairchem notices and falls back, logging The UMA fast path (merge_mole + compile) is only available for fixed composition, task, charge, and spin. Nothing is wrong when you see that, but a merge and a compile were
paid for and thrown away: pass inference_settings="batch" when the structures
vary. On CPU that was 18.8 s per single point against 2.6 s; on the H100 above,
0.38 s to the first result against 59.4 s. Which is why
examples/run_all_models.py
uses "batch" for its UMA lines.
Anything the four names do not cover — max_atoms, edge_chunk_size,
execution_mode, a different base_precision_dtype — goes through as a
fairchem.core InferenceSettings object:
from fairchem.core.units.mlip_unit.api.inference import InferenceSettings
atoms.calc = get_calculator(
"uma", task="omat",
inference_settings=InferenceSettings(merge_mole=True, compile=True, max_atoms=2048),
)
A misspelled name raises ValueError listing the four, before the checkpoint is
downloaded. fairchem checks it with a bare assert, which python -O removes.
eSEN-30M-OMat is not available through this package
eSEN-30M-OMat is an OMat24-trained fairchem model, so it looks like it should
sit next to UMA here. It does not, and the reason is structural rather than an
oversight:
- the checkpoint (
esen_30m_omat.pt, in the gated repofacebook/OMAT24) is a fairchem-core 1.x artefact, loaded withOCPCalculator(checkpoint_path=…); - fairchem-core 2.x — what the
umaextra installs — ships no eSEN architecture, andpretrained_mlip.available_modelslists only UMA plus the OMol25 / OC25 / ODAC eSEN checkpoints, none of them OMat24; - fairchem-core 1.10 requires
torch~=2.4,numpy<2and Python<3.13, so it cannot share an environment with the 2.x line, with MACE, or with much else.
Supporting it would mean a third isolated environment, as MACE has. If you need
it today, install fairchem-core<2 separately and use its own OCPCalculator.
For an OMat24-level model inside this package, use
get_calculator("mace", model="medium-omat-0") or
get_calculator("sevennet", model="7net-omat") — same dataset, same PBE(+U)
reference level.
Molecular systems (charge and spin)
Molecular models need two inputs that no bulk model does: the total charge
of the system and its spin multiplicity (2S+1). ASE has no standard place
for either, so they are passed through atoms.info, and the backends differ in
whether they read them at all.
| Backend | Molecular option | Takes charge / spin? |
|---|---|---|
esen |
OMol25 checkpoints | ✅ atoms.info["charge"], atoms.info["spin"] |
pyscf / gpu4pyscf |
Molecular HF/DFT | ✅ atoms.info or YAML; mismatches raise |
uma |
task="omol" |
✅ atoms.info["charge"], atoms.info["spin"] |
sevennet |
modal="omol25_low" / "omol25_high" / "spice" / "qcml" |
❌ not supported by sevenn |
mace |
model="omol-0" / "MACE-OMOL-0" |
✅ explicit atoms.info charge/multiplicity |
mace |
head="omol" / "spice_wB97M" |
❌ the MH-1 molecular heads are fitted to neutral closed-shell data |
mace |
model="polar-1-s" / "polar-1-m" / "polar-1-l" |
✅ atoms.info["charge"], atoms.info["spin"], atoms.info["external_field"] |
orb |
model="orbmol-v2" (the default) |
✅ atoms.info["charge"], atoms.info["spin"] — required, not defaulted |
UMA: set both keys explicitly
from ase.build import molecule
from ase_calculator_kit import get_calculator
atoms = molecule("H2O")
atoms.info["charge"] = 0 # total charge
atoms.info["spin"] = 1 # spin multiplicity, 2S+1 (1 = closed shell)
atoms.calc = get_calculator("uma", task="omol")
print(atoms.get_potential_energy())
A hydroxide anion and a neutral radical are the cases that actually bite:
oh_minus = molecule("OH")
oh_minus.info["charge"] = -1 # anion
oh_minus.info["spin"] = 1 # closed shell
oh_minus.calc = get_calculator("uma", task="omol")
oh_radical = molecule("OH")
oh_radical.info["charge"] = 0
oh_radical.info["spin"] = 2 # doublet — one unpaired electron
oh_radical.calc = get_calculator("uma", task="omol")
Set both fields explicitly. Since 0.5.10, kit-created UMA/eSEN
omolcalculators reject missing or inconsistent states before inference or cache use. Upstream fairchem alone still defaultscharge=0/spin=1in theatoms.infodict you passed in, and returns a neutral closed-shell result. An ion or an open-shell species then comes back silently wrong. Set both keys on every molecular structure, including the ones you think are obvious.
Both keys are integers. charge may range from -100 to 100 and spin from 1 to
100; they are read only by the omol head, and other UMA tasks ignore them.
SevenNet: no charge or spin input
sevenn has no charge or spin argument, so the modal embedding is the only
handle on the molecular reference data. Charged species and a chosen open-shell
state cannot be expressed — omol25_high selects a model trained on
high-spin configurations, but it is not a multiplicity you set per structure.
Use get_calculator("uma", task="omol") when the charge and spin of the system
matter.
MACE-MH-1: molecular heads, no charge or spin
MACE-MH-1's omol head was fine-tuned on a subsample of OMol25 that is
explicitly neutral and closed-shell, and spice_wB97M on SPICE-1, which is
likewise neutral. There is no charge or spin input to set, and no head that
covers ions or a chosen open-shell state. Use get_calculator("uma", task="omol"), or MACE-Polar below, when the charge and spin of the system
matter.
MACE-Polar: charge, spin, and an applied field
polar-1-s / polar-1-m / polar-1-l are MACE's electrostatics foundation
models, trained on OMol25 at ωB97M-V. They are the one group of checkpoints
loaded through upstream's mace_polar rather than mace_mp — the model name is
what switches the loader, so nothing else changes at the call site.
They need one package on top of mace-torch. It is not on PyPI, so no extra of
this project can pull it in and you install it yourself, into the MACE
environment:
.venv-mace/bin/pip install git+https://github.com/WillBaldwin0/graph_electrostatics.git@v0.4.0
That repository builds a distribution named graph_longrange — the module the
checkpoints unpickle. The name mismatch matters at the command line: pip rejects
the graph_electrostatics @ git+… spelling as an inconsistent name, so pass the
bare URL as above. Ask for a polar checkpoint without it and
get_calculator raises MissingDependencyError with this command, rather than
letting MACE fail with No module named 'graph_longrange' after the download.
from ase.build import molecule
from ase_calculator_kit import get_calculator
atoms = molecule("H2O")
atoms.info["charge"] = 0
atoms.info["spin"] = 1
atoms.info["external_field"] = [0.0, 0.0, 0.01] # V/Å, along z
atoms.calc = get_calculator("mace", model="polar-1-m")
print(atoms.get_potential_energy())
print(atoms.calc.results["dipole"]) # non-periodic cells only
Beyond energy, forces and stress, calc.results carries dipole, charges,
spins and an electrostatic energy breakdown (electrostatic_energy,
electron_energy, interaction_energy). Read them from calc.results
directly: MACE leaves them out of implemented_properties, so ASE's own
accessors do not see them and atoms.get_dipole_moment() raises
PropertyNotImplementedError even though calc.results["dipole"] is there.
Partial charges are also not a uniquely defined quantity — read them as a
decomposition of the model's electrostatics, not as a measurement.
Set charge and multiplicity explicitly. Since 0.5.10 the kit rejects missing or inconsistent electronic states for molecular MACE. An omitted
external_fieldstill means zero field; set it explicitly for field-on runs.
dispersion=True is refused for all three: OMol25's ωB97M-V reference already
carries the nonlocal VV10 term, so a D3 correction would double-count it.
polar-1-m and polar-1-l carry 12 Å and 18 Å receptive fields; polar-1-s is
the small model. All three live in the MACE environment like every other MACE
checkpoint, and all three are stored in float32 — with this package's
default_dtype="float64" default, MACE logs that it is converting them, which
is the conversion and not a failure.
OrbMol-v2: charge and spin, enforced
OrbMol-v2 reads the same two atoms.info keys and raises when they are missing.
oh_minus = molecule("OH")
oh_minus.info["charge"] = -1
oh_minus.info["spin"] = 1
oh_minus.calc = get_calculator("orb")
print(oh_minus.get_potential_energy())
forgot = molecule("OH")
forgot.calc = get_calculator("orb")
forgot.get_potential_energy()
# ValueError: atoms.info must contain both 'charge' and 'spin'
Since 0.5.10, kit-created UMA/eSEN omol and molecular MACE also require both keys.
The two agree closely where both are defined. On eight small molecules and ions
— neutral, anionic and open-shell, isolated — get_calculator("orb") and
get_calculator("uma", task="omol") with uma-s-1p2p1 differed by 0.18 to
5.87 meV in total energy, on absolute energies of 1.5 to 6.3 keV. Both are
OMol25 ωB97M-V models, so their absolute energy scales are directly comparable.
Force directions were identical (direction cosine 1.0000 throughout) and
components agreed to 0.05 eV/Å, except the O₂ triplet at 0.21 eV/Å — that and
the acetate anion were the two largest disagreements.
They also handle a periodic box differently, and that is a real difference
rather than a tolerance. Put each molecule in a 14 Å cell with pbc=True and
UMA returns the isolated energy unchanged to 1e-7 eV: its omol head has no
long-range electrostatic term, so nothing reaches past the cutoff. OrbMol-v2's
Coulomb term is an Ewald sum and is not cutoff-limited, so it moves — by under
3 meV for the neutral molecules, and by 1.45 eV for acetate⁻, which the Ewald
convention computes against a neutralizing background. See
OrbMol model.
Non-periodic cells
ase.build.molecule() returns pbc=False with a zero cell, which UMA accepts.
UMA rejects only two ambiguous cases: a fully periodic structure whose cell is
all zeros, and a partially periodic one (pbc=[True, True, False]).
Dispersion
Add a Grimme-D3(BJ) correction on top of MLIP models with dispersion=True:
atoms.calc = get_calculator("uma", task="omat", dispersion=True)
atoms.calc = get_calculator("uma", task="oc20", dispersion=True)
atoms.calc = get_calculator("chgnet", dispersion=True)
atoms.calc = get_calculator("sevennet", modal="pet_mad", dispersion=True)
atoms.calc = get_calculator("mace", head="omat_pbe", dispersion=True)
With dispersion=True the returned object is an ASE
SumCalculator([backend_calculator, d3_calculator]), not the backend calculator
itself — it satisfies the same ase.Calculator interface, but do not rely on
backend-specific attributes or isinstance checks against the backend class.
Some models already include dispersion in their training functional, so
dispersion=True is refused for them with DispersionError:
get_calculator("uma", task="omol", dispersion=True) # DispersionError: ωB97M-V includes VV10
get_calculator("sevennet", modal="spice", dispersion=True) # DispersionError: SPICE is ωB97M-D3(BJ)
get_calculator("mace", head="omol", dispersion=True) # DispersionError: ωB97M-VV10
Every molecular task falls in this category — molecular reference data is
almost always dispersion-corrected, each dataset in its own way (VV10, an
explicit D3(BJ) term, or MBD-NL). That verdict cannot be overridden with
dispersion_xc=; remove dispersion=True instead. A task this table does not
cover yet is refused by default but can be unlocked with an explicit
dispersion_xc once you have checked its functional yourself.
Choosing the damping function
dispersion_damping= selects between Becke-Johnson ("bj", the default) and
zero damping ("zero"):
atoms.calc = get_calculator(
"uma", task="oc20", dispersion=True, dispersion_damping="zero"
)
The two are separately fitted parameter sets, not a numerical detail. D3 does not screen a metal's C6 coefficients, so on molecule–metal systems the choice can move the correction by a factor of two — for RPBE, benzene on Pt(111) picks up −4.6 eV of dispersion with BJ damping against −2.4 eV with zero damping.
Match the reference dataset when the model has one. OC20 and OC22 carry no
dispersion at all, so either damping is a choice you are making rather than
reproducing; OC25, in contrast, is RPBE + D3 with zero damping, which is
why task="oc25" refuses an added correction outright.
Note also that RPBE's D3 parameters — both dampings — are absent from Grimme's published fits and carry no citation in the reference parameter tables, unlike PBE's. Treat RPBE-D3 numbers on metals as indicative.
Cutoff and smoothing follow PFP
The D3 term runs at cutoff=14.0 Å with cutoff_smoothing="poly" — PFP
v7.0.0+'s settings, not torch-dftd's own defaults of 95 Bohr (50.3 Å) and no
smoothing.
This package exists to compare models against each other, and PFP is one of the
models being compared. Left at torch-dftd's defaults, the dispersion term added
to a SevenNet or MACE energy would be a different quantity from the one inside
a PFP energy, on top of the model difference you are trying to measure.
Matlantis published the validation for the shorter cutoff: an MAE of
0.0024 eV over the Wellendorff adsorption benchmark — negligible against the
0.01 eV scale those numbers live on — and no change in the 90th percentile of
COD unit-cell-volume error, in exchange for roughly three times the reachable
system size. "none" smoothing was a PFP bug fixed in v7.0.0; it leaves the
force discontinuous at the cutoff radius, which is exactly what a relaxation or
MD run walks into.
Both are overridable, so a dataset built on torch-dftd's defaults stays reproducible:
atoms.calc = get_calculator(
"chgnet", dispersion=True,
dispersion_cutoff=50.3, dispersion_cutoff_smoothing="none",
)
cnthr, the coordination-number cutoff, is left at torch-dftd's own default;
torch-dftd clamps it to cutoff when it is larger, which is the same path PFP
goes through.
See docs/models.md for the full per-model table.
MACE needs its own environment
MACE is supported since 0.5.0, but it cannot share an environment with the other MLIP backends, and no amount of pip flags will change that:
| Package | e3nn requirement |
|---|---|
mace-torch |
==0.4.4 |
sevenn |
>=0.5.0 |
fairchem-core |
>=0.5 |
mattersim |
>=0.5.0 |
nequip |
>=0.6.0,<0.7.0 |
An exact pin against four lower bounds has no solution, so mace is deliberately
excluded from the all extra. Give it a second virtual environment:
python -m venv .venv-mace
.venv-mace/bin/pip install "ase-calculator-kit[mace]"
# with the D3 correction as well
.venv-mace/bin/pip install "ase-calculator-kit[mace,dispersion]"
Everything else in this package behaves identically there — the factory, the
dispersion policy, the DFT backends. Only the other MLIP backends are missing,
and asking for one reports the usual MissingDependencyError. Conversely, in
your main environment get_calculator("mace") raises a MissingDependencyError
that names this constraint rather than suggesting an install that cannot work.
from ase.build import bulk
from ase_calculator_kit import get_calculator
atoms = bulk("Cu", "fcc", a=3.6)
atoms.calc = get_calculator("mace", head="omat_pbe") # model="mh-1" by default
print(atoms.get_potential_energy())
The MH-1 checkpoint (~57 MB) is downloaded on first use and cached in
~/.cache/mace. Its model card states an ASL license, which is not the MIT
license of this package — check the model's own terms before using it in
commercial work.
GPU acceleration (accelerator=)
MACE can replace its equivariant tensor products with
cuequivariance or
openequivariance kernels on
CUDA. accelerator= selects that, and defaults to "auto":
accelerator |
Behaviour |
|---|---|
"auto" (default) |
Use cuequivariance when it is installed and demonstrably correct on this GPU; otherwise fall back to the plain model with a RuntimeWarning |
"cueq" |
Force cuequivariance. Errors are yours to see — no probe, no fallback |
"oeq" |
Force openequivariance |
"none" |
Plain model, probe included in what is skipped |
.venv-mace/bin/pip install "mace-torch[cueq,cueq-cuda-12]"
atoms.calc = get_calculator("mace") # auto
atoms.calc = get_calculator("mace", accelerator="cueq") # force it
atoms.calc = get_calculator("mace", accelerator="none") # never
Why "auto" measures instead of asking "is it importable". Both cheaper
questions have been observed to give the wrong answer:
- On a Tesla V100 (sm_70), cuequivariance 0.11 imports, the calculator builds,
and then the first energy evaluation dies with
cudaErrorNoKernelImageForDevice— the shipped kernels do not cover that architecture. An import check would hand back a calculator that explodes later, in the middle of a run. - ACEsuit/mace#1298 reports cuequivariance returning +5500 eV where the plain model returns −200 eV on a multi-head checkpoint — without raising at all.
So "auto" builds both models, compares them on a two-atom cell, and keeps the
accelerated one only if the energies agree. The extra cost is one model build
and two tiny single points, paid only when cuequivariance is installed; if it
is not, "auto" is free. enable_cueq= / enable_oeq= can still be passed
directly, and an explicit flag skips the probe.
Measured on a V100 with cuequivariance 0.11.1 installed: accelerator="auto"
warns, falls back, and returns −3.74034995 eV for bulk("Cu") — identical to
CPU float64 to 1e-13 eV — while accelerator="cueq" raises.
OrbMol (orb-models)
OrbMol-v2 shares an environment happily with every other backend — there is no
e3nn problem here and no second virtual environment to make. What it has is a
Python-version problem, and it is one line of upstream metadata deep:
orb-models pins dm-tree==0.1.8, and dm-tree 0.1.8's newest wheels are cp312
on every platform. On Python 3.13 or 3.14 pip therefore falls into a source
build that needs a C++ toolchain and a CMake old enough to accept the project,
and stops:
ERROR: Failed building wheel for dm-tree
That is why orb is not part of [all]: an [all] carrying it would fail to
install on two of the three Pythons this package supports.
On Python 3.12, nothing special is needed:
pip install "ase-calculator-kit[orb]"
On Python 3.13 and 3.14, override that one pin. dm-tree 0.1.10 ships cp313
and cp314 wheels, orb-models uses exactly two functions from it
(tree.flatten, tree.map_structure), and OrbMol-v2 on 3.13 with dm-tree
0.1.10 reproduced every one of this package's 3.12 reference energies to the
last digit. With uv, which has a dependency
override mechanism:
echo 'dm-tree>=0.1.10' > dm-tree-override.txt
uv pip install --override dm-tree-override.txt "ase-calculator-kit[orb]"
pip has no equivalent, so there the override is spelled --no-deps plus the
dependency list:
pip install "ase-calculator-kit" "dm-tree>=0.1.10"
pip install --no-deps "orb-models>=0.7,<0.8"
pip install "cached-path>=1.7.1" "scipy>=1.15.1" "torch>=2.8,<3" \
"tqdm>=4.67.1" "nvalchemi-toolkit-ops[torch]>=0.3.1,<0.4"
pip check will then report that orb-models 0.7.0 requires dm-tree==0.1.8.
That warning is the override working, not a broken install.
The pin is tracked upstream as orbital-materials/orb-models#168; it was introduced deliberately, in #78, to dodge a macOS build problem that dm-tree has since fixed. When it is relaxed, CI's wheel-availability check fails and the Python-versions table above gets updated.
OrbMol-v2 does not run on Apple Silicon GPUs — see
Apple Silicon (MPS) support — and needs
atoms.info["charge"] and atoms.info["spin"] on every structure, see
Molecular systems.
Development
python -m venv .venv
.venv/bin/pip install -e ".[dev]" -c constraints.txt
.venv/bin/pytest
# MACE has its own environment; the same suite runs there too
python -m venv .venv-mace
.venv-mace/bin/pip install -e ".[mace,dispersion,dev]" -c constraints.txt
.venv-mace/bin/pytest
# orb shares the main environment, but needs Python 3.12 (see above)
uv venv --python 3.12 .venv-orb
uv pip install --python .venv-orb/bin/python -e ".[orb,dev]" -c constraints.txt
.venv-orb/bin/pytest -m slow -k orb
pyproject.toml declares compatible version ranges so the package installs
next to whatever ASE/NNP versions you already have; constraints.txt pins the
exact combination that is tested, and CI installs with it.
pytest runs only the fast tests by default. Slow tests
(pytest -m slow) run real MLIP CPU single-point calculations and may download
model weights; install .[dev,all] -c constraints.txt first so every backend is
importable.
Further Reading
docs/models.md— per-model dispersion policy and training functionals.docs/code-guide_ja.md— 実装の化学的な判断と モジュールの責務(日本語).AGENTS.md— repository map, invariants, and conventions for AI coding agents (Claude, GPT, and others).CHANGELOG.md— release history.docs/releasing.md— how a release reaches PyPI and Zenodo.
Citation
If this package contributed to published work, please cite the archived
release. CITATION.cff holds the machine-readable metadata —
GitHub renders it under "Cite this repository", and Zenodo reads it when
minting the DOI.
@software{ase_calculator_kit,
title = {ase-calculator-kit: a unified ASE calculator factory for MLIP and DFT calculators},
author = {Wakamiya, Taishiro and Ishikawa, Atsushi},
year = {2026},
doi = {10.5281/zenodo.21807793},
url = {https://github.com/ishikawa-group/ase-calculator-kit}
}
10.5281/zenodo.21807793 is the concept DOI: it always resolves to the newest
archived version. To cite one specific release instead, use its version DOI from
the Zenodo record — 0.3.4 is
10.5281/zenodo.21807794.
License
MIT
Molecular PySCF and GPU4PySCF (0.5.9)
Molecular HF/DFT uses the same config-only factory as VASP/QE, with upstream PySCF energies and analytic gradients exposed through a small ASE adapter:
from ase.io import read
from ase_calculator_kit import get_calculator
atoms = read("complex.xyz")
atoms.calc = get_calculator(
"gpu4pyscf", config="examples/dft/gpu4pyscf_wb97mv.yaml",
overrides={"parameters": {"charge": 2, "multiplicity": 3}},
write_resolved_config=True,
)
forces = atoms.get_forces() # eV/Angstrom (request first)
energy = atoms.get_potential_energy() # eV, reuses the SCF above
Install only the required extra, preferably in a dedicated environment:
pip install 'ase-calculator-kit[pyscf]'
# Linux x86_64, NVIDIA GPU, CUDA Toolkit 12.x; validated with CUDA 12.8:
pip install 'ase-calculator-kit[gpu4pyscf-cuda12x,pyscf-dispersion]' -c constraints.txt
# CPU D3(BJ)/D4 (validated on Linux):
pip install 'ase-calculator-kit[pyscf,pyscf-dispersion]'
These extras are excluded from all. CPU PySCF and pyscf-dispersion resolve
on Linux with Python 3.12–3.14; actual numerical validation uses Python 3.12.
The CUDA extra supports Python 3.12/3.13, not 3.14, because the validated
CuPy 13.4.1/cuTENSOR 2.2.0 pair has no cp314 wheel. GPU wheels do not support
macOS. Bare CPU PySCF was also tested on Apple Silicon; the dispersion extra
requires >=1.5, which is unavailable on macOS at this release. The older macOS
1.0.0 wheel fails during import and is intentionally not accepted.
See molecular configuration and validation for the complete settings, scope, CPU/GPU comparisons, and limitations. The primary examples use omegaB97M-V/def2-TZVPD + VV10, with explicit electronic states and grids; SMD water, Ru ECP and PBE-D3 examples are separate files.
python examples/dft/run_pyscf.py complex.xyz \
--config examples/dft/gpu4pyscf_wb97mv.yaml --output runs/complex
python examples/dft/run_pyscf.py complex.xyz \
--config examples/dft/gpu4pyscf_wb97mv_smd.yaml --output runs/complex-smd \
--optimize --fmax 0.05 --steps 100
The example writes energy/forces/coordinates to results.npz, settings,
versions and convergence to results.json, the effective settings to
resolved_calculator_config.yaml, and the final geometry to final.xyz.
Optimization also writes a trajectory. The output directory must be new;
SCF failure or incomplete optimization exits with an error. Choose charge and
multiplicity in the YAML for each system: the supplied neutral singlet examples
are examples, not a default inference about your complex.
eSEN OMol25
atoms.info.update(charge=0, spin=1) # spin is multiplicity
atoms.calc = get_calculator("esen", device="cuda")
The default is esen-sm-conserving-all-omol, whose forces are energy gradients.
Also selectable with model=: esen-sm-direct-all-omol and
esen-md-direct-all-omol. Direct models predict forces separately and should
not be assumed to conserve energy. All three use task="omol" only and reject
additional D3: OMol25's omegaB97M-V/def2-TZVPD reference already includes VV10.
They use fairchem-core 2.22+, with inference_settings="batch" by default,
CPU/CUDA devices, and Hugging Face facebook/OMol25 access. No MPS support is
claimed. [esen] is an alias for the same dependency as [uma], already in
[all]; it adds no conflicting stack. Legacy eSEN-30M-OMat remains unsupported.
Set charge/multiplicity explicitly: since 0.5.10 the kit rejects missing or
inconsistent electronic states for both eSEN and UMA omol before inference.
Sharing electronic states between MLIP and PySCF
atoms.info.update(charge=-1, spin=1) # anion, singlet
atoms.calc = get_calculator("pyscf", config={
"calculator": "pyscf",
"parameters": {"basis": "def2-tzvpd", "xc": "wb97m_v"},
})
PySCF reads the same atoms.info fields as UMA/OrbMol and converts multiplicity
into PySCF's spin = multiplicity - 1. You may also supply charge/spin or
multiplicity in YAML, but any disagreement raises before calculation or
returning a cached result. Missing values never default to neutral singlet.
Changing charge/spin alone triggers a recalculation. calc.metadata records the
actual values and sources; write_resolved_config=True records the effective
state in YAML at calculation time. Initial per-atom charges/magnetic moments
are not interpreted as the total charge or multiplicity. The execution example
also saves final.extxyz with charge/multiplicity for reuse; ordinary XYZ does
not preserve that metadata.
Validated on Apple Silicon CPU (2026-09-22), Python 3.12, fairchem-core 2.22.0,
PyTorch 2.13.0, inference_settings="batch". All three eSEN checkpoints returned
finite H2O energies and forces; the conserving model also handled OH doublet
and OH-minus singlet through the same calculator, with changed results after
info-only updates. This release's eSEN numerical check is CPU-only; CUDA is
provided through upstream fairchem but was not re-measured for eSEN here.
| eSEN OMol25 checkpoint | H2O energy (eV) |
|---|---|
esen-sm-conserving-all-omol |
-2079.861931112 |
esen-sm-direct-all-omol |
-2079.862334347 |
esen-md-direct-all-omol |
-2079.862224540 |
The checked Hugging Face snapshot is
facebook/OMol25@f3fdf382be3c22e8c67d1d76bacb1961627cf8d8; all three downloaded
checkpoint SHA256 hashes matched the official file pages. No weights or tokens
are included in this repository. Model access is granted per Hugging Face
account and repository: UMA access does not automatically grant OMol25 access.
0.5.10: input checks, SCF reuse, and molecular MACE
VASP/QE reject unknown config/profile keys before execution. VASP calculation
keywords are checked by ASE; QE checks writer parameters and flat/nested/indexed
pw.x namelist keys against the installed ASE vocabulary. Invalid settings do
not produce a resolved-config file. Correct existing YAML remains valid.
UMA/eSEN omol, MACE-OMOL-0 and MACE-POLAR-1 require integer total charge and
positive spin multiplicity in atoms.info; electron counts must be consistent.
No neutral-singlet values are inserted. Missing/invalid state is also rejected
before cached results are returned. For MACE, custom info_keys mappings are
respected. This input requirement is stricter than 0.5.9; existing scripts must
set both values. OrbMol and PySCF already require explicit electronic states.
from ase.build import molecule
from ase_calculator_kit import get_calculator
atoms = molecule("H2O")
atoms.info.update(charge=0, spin=1) # multiplicity, not PySCF's 2S
atoms.calc = get_calculator("mace", model="MACE-OMOL-0", device="cpu")
# MACE-POLAR-1 defaults to medium; polar-1-s/m/l remain selectable.
atoms.info["external_field"] = [0.0, 0.0, 0.0]
atoms.calc = get_calculator("mace", model="MACE-POLAR-1", device="cpu")
MACE-OMOL-0 uses the published extra-large checkpoint through mace_omol, not
MACE-MH-1's omol head. Additional D3 is refused for both OMOL-0 and POLAR-1
because their reference includes VV10. Use the existing separate [mace]
environment. POLAR-1 additionally needs the documented graph_longrange
installation from graph_electrostatics v0.4.0. No weights are bundled.
PySCF now reuses a converged SCF when forces are requested after energy at the
same geometry/electronic state. Changes or calc.reset() discard it. Once both
properties are cached, the SCF object and its log stream are released. This does
not add density-matrix reuse between geometries or checkpoint-based restart.
The PySCF execution example reads inputs before creating its output directory;
a missing/unreadable XYZ leaves that path available for a corrected retry.
Failures after output creation, including backend setup, produce a failure
results.json. Use a new output path for retrying a recorded calculation
failure; existing results are never overwritten automatically.
Molecular MACE was verified on Mac CPU with mace-torch 0.3.16 and
graph_longrange 0.4.0: H2O singlet, OH doublet, and OH-minus singlet returned
finite energies/forces, and missing electronic state was rejected. H2O energies
were -2079.863496759 eV (OMOL-0) and -2079.862579249 eV (POLAR-1 medium).
These are API checks, not a model-accuracy benchmark. Small/large POLAR loader
routing is covered by unit tests; the new numerical check used medium.
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