Python interface to cell atlas approximations
Cell atlases such as Tabula Muris and Tabula Sapiens are multi-organ single cell omics data sets describing entire organisms. A cell atlas approximation is a lossy and lightweight compression of a cell atlas that can be streamed via the internet.
This project enables biologists, doctors, and data scientist to quickly find answers for questions such as:
- What is the expression of a specific gene in human lung?
- What are the marker genes of a specific cell type in mouse pancreas?
- What fraction of cells (of a specific type) express a gene of interest?
In addition to this interface, these questions can be asked in R or in a language agnostic manner using the REST API. See the documentation for more info.
Documentation: https://atlasapprox.readthedocs.io/en/latest/python/index.html
Development: https://github.com/fabilab/cell_atlas_approximations_API
1 maintainer
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file atlasapprox-0.2.4.tar.gz.
File metadata
- Download URL: atlasapprox-0.2.4.tar.gz
- Upload date:
- Size: 10.4 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via:
twine/5.1.1 CPython/3.12.5
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
8d8f08d33c2ac284acf1d8767cfdb0e1089f9e964411dd094af43140ae6ee0aa
|
|
| MD5 |
8a6749160465bf86f08c79e76029c8e6
|
|
| BLAKE2b-256 |
cd0d1be4ea91083ce063d0aef5eb0ec7034cfb0b1378eaf70afe7e7b4f057d6b
|
File details
Details for the file atlasapprox-0.2.4-py3-none-any.whl.
File metadata
- Download URL: atlasapprox-0.2.4-py3-none-any.whl
- Upload date:
- Size: 9.4 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via:
twine/5.1.1 CPython/3.12.5
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
d135030b46b884dce8e7ad502b59c992e05c24d229eb5a4ee8211fa2c9eac750
|
|
| MD5 |
7cde6ad45de2683ad5d2826f0acb2a0d
|
|
| BLAKE2b-256 |
251695f126e0cc3af0a73b1901029719fa6268a34dd7d2bcee5a80a2e2c9f6dc
|
