Library for analysing atomic resolution images
Project description
Atomap
Webpage: https://atomap.org
Webpage (development version), click the atomap.gitlab.io link: https://gitlab.com/atomap/atomap/builds/artifacts/master/file/public_development/index.html?job=pages_development
Atomap is a Python library for analysing atomic resolution scanning transmission electron microscopy images. It relies on fitting 2-D Gaussian functions to every atomic column in an image, and automatically finding all the atomic planes with the largest spacings.
Installing
The easiest way is via the Anaconda Python distribution, and installing with:
conda install atomap -c conda-forge
It can also be installed via PyPI:
pip3 install atomap
More install instructions: https://atomap.org/install.html
Using
import atomap.api as am
sublattice = am.dummy_data.get_simple_cubic_sublattice()
sublattice.construct_zone_axes()
sublattice.refine_atom_positions_using_center_of_mass()
sublattice.plot()
More information on how to use Atomap: https://atomap.org/start_atomap.html
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