Automated analysis of MEA datasets
Project description
automea
automea (Automated analysis of MEA datasets) is a open-source Python package for the analysis of Micro-Electrode Array (MEA) datasets.
Bursts are detected using the Max Interval Method. Users can manually set Max Interval Parameters, or can use a machine learning model that dynamically predicts optimal parameters for specific recording times. Several models are distributed with automea, and users are free to fine-tune the existing models for their specific needs, or upload new models completely.
The machine-learning-based burst detection routine is explained in the paper accompanying the package.
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