Radiomics-related modules for extraction and experimenting
Project description
Framework for simple experimentation with radiomics features
docker run -p 8501:8501 -v <your_data_dir>:/data -it pwoznicki/autorad:latest |
pip install -U autorad |
Download desktop app (experimental)
Installation from source
git clone https://github.com/pwoznicki/AutoRadiomics.git
cd AutoRadiomics
pip install -e .
Getting started
Tutorials can be found in the examples directory:
Documentation is available at autoradiomics.readthedocs.io.
Web application
To use the application, make sure you have its dependencies installed:
pip install -e ".[app]"
The application can be started from the root directory with:
streamlit run autorad/webapp/app.py
By default it willl run at http://localhost:8501/.
For more information about AutoRadiomics, please read our paper:
AutoRadiomics: A Framework for Reproducible Radiomics Research;
P Woznicki, F Laqua, T Bley, B Baeßler;
Frontiers in Radiology, 22
Please cite it if you're using the framework for your research.
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