# BAM shot
该包用于对BAM文件画图,依赖samtools, python3.X, pyssam版本: 主要参数:
bam: BAM文件
ref: 参考基因组FASTA,需要提前使用samtools faidx构建索引
chrom: 染色体
start: 起始位置
end:终止位置
extend:两端拓展长度
……
Metadata
Release files for bam-shot 0.0.1
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Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| bam_shot-0.0.1.tar.gz | 4.8 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| bam_shot-0.0.1-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 9.5 kB
Release files / bam_shot-0.0.1.tar.gz
| Download URL | bam_shot-0.0.1.tar.gz |
|---|---|
| Size | 4.8 kB |
| Tags | Source |
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SHA-256 checksum How to use checksums |
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twine/3.7.0 importlib_metadata/4.8.2 pkginfo/1.8.1 requests/2.26.0 requests-toolbelt/0.9.1 tqdm/4.62.3 CPython/3.9.7
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Release files / bam_shot-0.0.1-py3-none-any.whl
| Download URL | bam_shot-0.0.1-py3-none-any.whl |
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| Size | 4.7 kB |
| Tags | Python 3 |
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SHA-256 checksum How to use checksums |
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twine/3.7.0 importlib_metadata/4.8.2 pkginfo/1.8.1 requests/2.26.0 requests-toolbelt/0.9.1 tqdm/4.62.3 CPython/3.9.7
|