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Utility modules for deploying workflows in the BBCF

Project description

bbcflib 1.4.0

Copyright 2011 EPFL BBCF <webmaster dot bbcf at epfl dot ch>

bbcflib is a set of Python modules for accessing facilities used by the Bioinformatics and Biostatistics Core Facility˘(BBCF) at the EPFL.

bbcflib is released under the GNU General Public License 3.0. A copy of this license is in the LICENSE.txt file.


bbcflib requires: * Python >=2.6 * mailer >=0.6 ( * bein ( * numpy (

bbcflib doesn’t have regular releases, since it is an internally used library. You should download the latest source code from GitHub, either by going to

and clicking on “Downloads”, or by cloning the git repository with

$ git clone

Once you have the source code, run

$ python build $ sudo python install

to install it. If you need to install it in a particular directory, use

$ sudo python install –prefix=/prefix/path

Then the modules will go in /prefix/path/lib/pythonX.Y/site-packages, where X.Y is the version of Python you run it with.

To run the test suite, in the distribution directory, run

$ nosetests

Full documentation

The full documentation can be found [on our website](

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