Blood Cells Count

Count red, white blood cells to detect various diseases such as blood cancer (leukemia), lower red blood cells (anemia)...

Table of Contents

• Project Structure
• Install
• Usage
• Develop
• License

Project Structure

bc-count/
|-- bc-count/
|   |-- test/
|   |   |-- test_data.py
|   |   |-- test_main.py
|   |   |-- test_model.py
|   |   
|   |-- data.py
|   |-- main.py
|   |-- model.py
|
|-- bin/
|   |-- bc-count
|
|-- docs/
|
|-- data/
|   |-- rbc/
|   |-- wbc/
|
|-- models/
|
|-- AUTHORS
|-- LICENSE
|-- README.md
|-- TODO.md
|-- requirements.txt 
|-- setup.py

Install

• Install straight from PyPI using pip:

$ pip install bc-count

Usage

Please read bc-count --help before using it -o flag is optional (defaults to out/ directory)

• Count blood cells (-r for red and -w for white):

$ bc-count -r <blood-cell-image>

• Predict blood cell image:

$ bc-count predict -r <blood-cell-image>

• Train a new model:

$ bc-count train -r <model-name>

Develop

• Download the project:

$ git clone https://github.com/nemo256/bc-count
$ cd bc-count

• Activate virtual environment:

$ python -m venv venv
$ source venv/bin/activate
$ pip install -r requirements.txt

• Now just adapt the code to your need and then run using the command:

$ python bc-count/main.py

License

• Please read cell-count/LICENSE.