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BEL Repository build zenodo

A utility for loading data from repositories of BEL documents with PyBEL [1].

Installation Current version on PyPI Stable Supported Python Versions License

bel_repository can be installed from PyPI with the following command:

$ pip install bel-repository

The latest version can be installed from GitHub with:

$ pip install git+https://github.com/pybel/bel-repository.git

Usage

from typing import Mapping

from bel_repository import BELRepository
from pybel import BELGraph

# Build a repository by giving a folder
bel_repository = BELRepository('/path/to/folder/with/bel/')

# Get a mapping from paths to graphs
graphs: Mapping[str, BELGraph] = bel_repository.get_graphs()

# Get a combine graph
graph: BELGraph = bel_repository.get_graph()

Example BEL Repositories

Each of these repositories has BEL content that can be pip installed:

More publicly available BEL content can be found in the listing in this blog post.

References

Release files for bel-repository 0.1.2

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for bel-repository 0.1.2
File Size Uploaded
bel_repository-0.1.2.tar.gz 11.9 kB Details

Built distribution (wheel)

Table of built distributions (wheels) for bel-repository 0.1.2
File Interpreter ABI Platform
bel_repository-0.1.2-py3-none-any.whl Python 3 none any Details

Total release size: 23.1 kB

Release files / bel_repository-0.1.2.tar.gz

Download URL bel_repository-0.1.2.tar.gz
Size 11.9 kB
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a47677c9b0d7b99561782b6724fd30c1581e8dd894fe5b1ff7d254fdfbd96e1e
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Uploaded via twine/3.1.1 pkginfo/1.5.0.1 requests/2.23.0 setuptools/46.1.3 requests-toolbelt/0.9.1 tqdm/4.45.0 CPython/3.7.7

Release files / bel_repository-0.1.2-py3-none-any.whl

Download URL bel_repository-0.1.2-py3-none-any.whl
Size 11.2 kB
Tags Python 3
SHA-256 checksum
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Uploaded using Trusted Publishing?
What is trusted publishing?
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Uploaded via twine/3.1.1 pkginfo/1.5.0.1 requests/2.23.0 setuptools/46.1.3 requests-toolbelt/0.9.1 tqdm/4.45.0 CPython/3.7.7

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