bifrost_bridge
bifrost_bridge converts outputs from multiple bioinformatics QC tools into normalized TSV files and can combine them into a single QC table.
Development
python3 -m venv .venv
source .venv/bin/activate
pip install -e .[dev]
pytest
CLI
Installed commands:
bridge_mlstbridge_fastpbridge_quastbridge_plasmidfinderbridge_amrfinderplusbridge_brackenbridge_pmlstbridge_rmlstbridge_shovillbridge_ssiambbridge_qc
Use --help on each command for arguments.
2 maintainers
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