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Assay planning, schedule-aware experiment orchestration, and outcome interpretation for lab-in-the-loop proteomics

Project description

bijux-proteomics-lab

Python 3.11+ Typing: typed License: Apache-2.0 CI Status GitHub Repository

Package Family

agentic-proteins bijux-proteomics-foundation bijux-proteomics-core bijux-proteomics-intelligence bijux-proteomics-knowledge bijux-proteomics-lab

Agentic docs Foundation docs Core docs Intelligence docs Knowledge docs Lab docs

bijux-proteomics-lab converts scientific requirements into executable assay plans, dependency-aware schedules, and outcome interpretation that feeds back into program progression decisions.

Use this package when you need lab-in-the-loop planning under gate constraints, capacity-aware batch construction, and rerun recommendations tied to assay outcomes.

Why teams pick this package

  • practical lab planning built around dependencies, capacity, and timing limits
  • structured assay plans and review packets ready for scientific operations
  • outcome interpretation flows that support rerun and escalation decisions
  • repository contracts for integrating plan queues and feedback loops

Typical use cases

  • convert candidate requirements into executable assay schedules
  • sequence assay batches while respecting constraints and review gates
  • summarize execution outcomes and recommend reruns with explicit rationale
  • track plan quality trends and feed outcomes back into decision pipelines

Installation

pip install bijux-proteomics-lab

Quick start

from bijux_proteomics_lab import planning, outcomes, repositories

Package boundaries

This package owns assay planning, schedule generation, outcome interpretation, and rerun strategy support.

It does not own program-stage authority, ranking policy, or evidence truth semantics.

Source guide

Documentation

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