Convert miRBase to BEL
Project description
Enumerate miRBase namespace, produce equivalency table, and predicted MTI relationships
Installation
bio2bel_mirbase can be installed from the latest code on GitHub with:
$ python3 -m pip install git+https://github.com/bio2bel/mirbase.git@master
References
http://identifiers.org/mirbase/ and http://identifiers.org/mirbase.mature/
Ana Kozomara, Sam Griffiths-Jones; miRBase: annotating high confidence microRNAs using deep sequencing data. Nucleic Acids Res 2014; 42 (D1): D68-D73.
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
bio2bel_mirbase-0.1.0.tar.gz
(14.6 kB
view details)
Built Distribution
File details
Details for the file bio2bel_mirbase-0.1.0.tar.gz
.
File metadata
- Download URL: bio2bel_mirbase-0.1.0.tar.gz
- Upload date:
- Size: 14.6 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/1.12.1 pkginfo/1.4.2 requests/2.20.1 setuptools/40.6.2 requests-toolbelt/0.8.0 tqdm/4.28.1 CPython/3.7.0
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 | af3046d91e395ade3ea4a2118b849b2b5b78f18615ea987b14e2080a697dd37f |
|
MD5 | 01b7099493d86872af9d121f70030f06 |
|
BLAKE2b-256 | 3531a737c16e68f62ac6c2ecab9d3762acf69f14184082951b7882890f0eb0db |
File details
Details for the file bio2bel_mirbase-0.1.0-py37-none-any.whl
.
File metadata
- Download URL: bio2bel_mirbase-0.1.0-py37-none-any.whl
- Upload date:
- Size: 9.2 kB
- Tags: Python 3.7
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/1.12.1 pkginfo/1.4.2 requests/2.20.1 setuptools/40.6.2 requests-toolbelt/0.8.0 tqdm/4.28.1 CPython/3.7.0
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 | 61ba3e5e8281b67f1809a54c0cdab373137f8fc38a71515087737eb4300108e6 |
|
MD5 | e6c3c3e63c7c7d94a8051dbcb0dce920 |
|
BLAKE2b-256 | 49c3ed0ba6af6c48e445883c41274932a3bdaf8450b35ae70037712061007887 |