biobb

Introduction

Biobb (BioExcel building blocks) packages are Python building blocks that create new layer of compatibility and interoperability over popular bioinformatics tools. The latest documentation of our biobb collections can be found in our readthedocs sites:

• biobb_io [GitHub]: Biobb collection to fetch data to be consumed by the rest of the Biobbs.
• biobb_model [GitHub]: Biobb collection to check and model 3d protein structures.
• biobb_md [GitHub]: Biobb collection to perform molecular dynamics simulations.
• biobb_analysis [GitHub]: Biobb collection to perform analysis over molecular dynamics simulations.
• biobb_wf_mutations [GitHub]: Workflow performing molecular dynamics simulations of protein mutants.
• biobb_adapters [GitHub]: Biobb collection to use the building blocks with several workflow managers.
• biobb_common [GitHub]: Common tools to use the rest of the Biobb building blocks.
• biobb_template [GitHub]: Boilerplate code and template examples to create your own Biobbs.

Version

v1.0.2 May 2019 Release

Copyright & Licensing

This software has been developed in the MMB group (http://mmb.irbbarcelona.org) at the BSC (http://www.bsc.es/) & IRB (https://www.irbbarcelona.org/) for the European BioExcel (http://bioexcel.eu/), funded by the European Commission (EU H2020 675728).

• (c) 2015-2019 Barcelona Supercomputing Center
• (c) 2015-2019 Institute for Research in Biomedicine

Licensed under the Apache License 2.0, see the file LICENSE for details.