bioparse

A lightweight command-line toolkit for bioinformatics file parsing and analysis.

Installation

pip install bioparse

Commands

FASTQ Statistics

bioparse fastq-stats sample.fastq

VCF Filtering

bioparse vcf-filter sample.vcf --min-qual 30

Metadata

Release files for bioparse 0.1.1

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for bioparse 0.1.1
File	Size	Uploaded	Provenance	Actions
bioparse-0.1.1.tar.gz	2.0 kB	May 31, 2026	Without provenance	Details for bioparse-0.1.1.tar.gz

Built distribution (wheel)

Table of built distributions (wheels) for bioparse 0.1.1
File	Interpreter	ABI	Platform	Actions Reset
bioparse-0.1.1-py3-none-any.whl 2.4 kB May 31, 2026 Without provenance	Python 3	none	any	Details for bioparse-0.1.1-py3-none-any.whl

Total release size: 4.4 kB

Release files / bioparse-0.1.1.tar.gz

Download URL	bioparse-0.1.1.tar.gz
Size	2.0 kB
Tags	Source
SHA-256 checksum How to use checksums	`cff344a2689c6c67307e85df0acb61a2b47615d5580bc737973e7101021da3b5`
BLAKE2b-256 checksum How to use checksums	`ee1413c81a613cd45f17fee666343e0d511b8f87e9c2f35315910b598c4d4bab`
Upload date	May 31, 2026
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/6.2.0 CPython/3.13.5`

Release files / bioparse-0.1.1-py3-none-any.whl

Download URL	bioparse-0.1.1-py3-none-any.whl
Size	2.4 kB
Tags	Python 3
SHA-256 checksum How to use checksums	`73f3ba419790387ca580a3edaaff6fb386e900e75605fb8721fa511bcd429655`
BLAKE2b-256 checksum How to use checksums	`518d7056693fceea7e6034c1c6dbde53dc497c1c701a4e0bc94c7ceced7805d4`
Upload date	May 31, 2026
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/6.2.0 CPython/3.13.5`

Security for bioparse 0.1.1

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