bioscreen 0.1.0

A biosecurity screening library for AI protein design tools

bioscreen

A biosecurity screening library for AI protein design tools. Provides simple APIs to flag potentially hazardous protein design requests before processing.

⚠️ Version 0.1.0 - Infrastructure Release

This is an infrastructure setup release with minimal functionality. The core screening logic will be implemented in future versions. This release establishes:

• ✅ Package structure and build system
• ✅ Type-safe API design
• ✅ Comprehensive test suite
• ✅ CI/CD pipeline
• ✅ Code quality tooling (Black, Ruff, mypy)

Current behavior: All sequences are flagged as RiskLevel.GREEN with no actual screening performed.

Installation

pip install bioscreen

Quick Start

from bioscreen import ProteinScreener, RiskLevel

# Initialize the screener
screener = ProteinScreener()

# Screen a protein sequence
result = screener.screen_protein("MKTAYIAKQRQISFVKSHFSRQ")

print(f"Flagged: {result.flagged}")
print(f"Risk Level: {result.risk_level}")
print(f"Reason: {result.reason}")
# Output:
# Flagged: False
# Risk Level: RiskLevel.GREEN
# Reason: v0.1.0: No screening rules implemented yet