bmmltools 0.2.0

BioMaterial Machine Learning tools (bmmltools), package to do machine learning with large binary 3d images

bmmltools

Installation

Temporary installation path in the anaconda propt.

> (base) conda create -n new_env python=3.8
> (base) conda activate new_env
> (new_env) conda install pytables
> (new_env) cd [PATH TO bmmltools FOLDER]
> (new_env) [PATH TO bmmltools FOLDER] pip install -r requirements.txt
> (new_env) [PATH TO bmmltools FOLDER] python setup.py install

To run the bmmlboard, write in the anaconda prompt

> (base) conda activate new_env
> (new_env) python -m bmmltools.run_bmmlboard

assuming that bmmltools is installed in the "new_env" environment.

Example usage

See example folder