Bridging statistical cultures with some jazz
Project description
Bossanova
Unified mixed-effects modeling in Python. JAX + NumPy backends. R/lme4 parity.
Installation
uv add bossanova
or
pip install bossanova
Features
- One unified entry point —
model()handles linear, generalized, and mixed-effects models - R-style formulas —
y ~ x + (1|group),factor(),center(),scale() - Multiple inference strategies — asymptotic, bootstrap, permutation, cross-validation
- Marginal effects —
.explore()for estimated marginal means, slopes, and contrasts - JAX acceleration — automatic acceleration when JAX is available, NumPy fallback
- R parity — matches lme4/emmeans within f64 tolerance
Quick Example
from bossanova import model, load_dataset
df = load_dataset("sleepstudy")
# Fit a mixed model
m = model("Reaction ~ Days + (1 + Days | Subject)", data=df).fit()
m.params
# Perform bootstrapped parameter inference
m.infer(how='boot')
# Explore marginal effects
m.explore("Days")
m.effects
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