Visualisation and exploration of brain atlases and other anatomical data
brainrender is a python package for the visualization of three dimensional neuro-anatomical data. It can be used to render data from publicly available data set (e.g. Allen Brain atlas) as well as user generated experimental data. The goal of brainrender is to facilitate the exploration and dissemination of neuro-anatomical data by providing a user-friendly platform to create high-quality 3D renderings.
:books: brainrender docs
You can install
pip install brainrender
Contributions to brainrender are more than welcome. Please see the developers guide. Note that some tests are only run locally, by specifying
--runslow --runlocal in
If you use
brainrender in your work, please cite:
Claudi, F., Tyson, A. L., Petrucco, L., Margrie, T.W., Portugues, R., Branco, T. (2021) "Visualizing anatomically registered data with Brainrender" <i>eLife</i> 2021;10:e65751 [doi.org/10.7554/eLife.65751](https://doi.org/10.7554/eLife.65751)
The following images were created for the publication of the brainrender paper. References to the original data being visualised can also be found in the paper.
Release history Release notifications | RSS feed
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Hashes for brainrender-2.1.6-py3-none-any.whl