bsbt 0.1.2

BSBT: Binding Sequence Benchmarking Tool - A Python package for benchmarking protein language models and predicting antibody-antigen binding.

🧬 BSBT – Antibody to Antigen Prediction

BSBT (Biological Sequence Binding Tool) is a Python package designed to predict antigen sequences given antibody sequences.
The package is structured to allow easy experimentation and integration of protein language models (PLMs) or large language models (LLMs) in the future.

At the moment, BSBT provides a mock implementation using hardcoded antibody–antigen sequence mappings. This enables developers and researchers to test the pipeline structure before connecting it to real machine learning models.

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✨ Features

• 🔹 Simple antibody → antigen prediction interface (findAntigen)
• 🔹 Current backend: mock hardcoded mappings
• 🔹 Future backend: LLM or fine-tuned PLM integration
• 🔹 Modular design (easy to extend, swap components)
• 🔹 Unit tests included (pytest-ready)

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📦 Installation

You can install directly from PyPI (after publishing):

pip install bsbt