Canalyse

Analyse CURP result.

Install

Canalyse require python 3.6 or more upper version.

pip install canalyse

Usage

as a CLI

Verify statistical quantity of data

The variance should be grater than:

canalyse conductivity --quantity=variance --grater-than 2.0e-5 conductivity.dot

The variance should be less than:

canalyse conductivity --quantity=variance --less-than 2.0e-4 conductivity.dot

You can use --quantity option:

Option	description
variance	variance of data
average	average of data
std	standard deviation of data

as a Python package

from canalyse.parser import (
    ConductivityParser,
    ConductivityFormatter
)

conductivity_file = "conductivity.dot"
parser = ConductivityParser()
df = parser.run(conductivity_file)
formatter = ConductivityFormatter()
new_df = formatter.run(df)

and you can see the frame of new_df :

      source     target  conductivity  source_number source_residue  target_number target_residue
0  00001_MET  00036_PHE      0.017448              1            MET             36            PHE
1  00001_MET  00005_GLU      0.021499              1            MET              5            GLU
2  00001_MET  00004_ASP      0.012439              1            MET              4            ASP

Metadata

Release files for canalyse 0.0.6

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Built distribution (wheel)

Table of built distributions (wheels) for canalyse 0.0.6
File	Interpreter	ABI	Platform	Reset
canalyse-0.0.6-py2.py3-none-any.whl 8.8 kB Nov 12, 2021	Python 2, Python 3	none	any	Details

Release files / canalyse-0.0.6-py2.py3-none-any.whl

Download URL	canalyse-0.0.6-py2.py3-none-any.whl
Size	8.8 kB
Tags	Python 2 Python 3
SHA-256 checksum How to use checksums	`397f7e06b4034d3ee66f2073acd447effd256a86a5d4f8e4ba2458a1dec8957d`
BLAKE2b-256 checksum How to use checksums	`4a03dcce983f9e869b4d7bd3f02d679341cbb2b36fc531db3f8aa4ae2dc1f1ea`
Upload date	Nov 12, 2021
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/3.6.0 importlib_metadata/4.8.2 pkginfo/1.7.1 requests/2.26.0 requests-toolbelt/0.9.1 tqdm/4.62.3 CPython/3.9.8`