cansig 0.3.1

Discovering de novo shared transcriptional programs in single cancer cells

CanSig: Discovering de novo shared transcriptional programs in single cancer cells

A pipeline for single-cell cancer data sets analysis.

This repository accompanies our preprint.

Resources

• For tutorials and API description, see our documentation.
• If you found a bug or have an idea for improvement, submit an issue.
• If you would like to contribute, see the contribution guide.

Installation

$ pip install cansig

More information can be found in the Getting started section of our documentation.

Code contributors

To open-source the code, Git history was truncated. Hence, GitHub's statistics do not faithfully summarize the contributions. All persons listed below made major contributions to the code.

• Josephine Yates
• Florian Barkmann
• Paweł Czyż
• Elia Saquand