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cellseg: Multiclass Cell Segmentation

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Introduction

cellseg is a PyTorch (torch) based deep learning package aimed at multiclass cell segmentation.

Installation

pip install cellseg 

Or if you want to build from source

git clone git@github.com:Nelson-Gon/cellseg.git
cd cellseg
python setup.py install 

Development stage

  • Read Tiff Images

  • Read Non Tiff Images

  • Write Data Transformers and Loaders

  • Write functional model

  • Modify model weights/layers

Usage

# imports data, utils, model 
from cellseg import *

Metadata

Release files for cellseg 0.0.0

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Source distribution for cellseg 0.0.0
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