cernml-coi-utils 0.3.1

Utilities for the Common Optimization Interfaces

Utilities for the Common Optimization Interfaces

CERN ML is the project of bringing numerical optimization, machine learning and reinforcement learning to the operation of the CERN accelerator complex. The COI are common interfaces that make it posisble to use numerical optimization and reinforcement learning on the same optimization problems.

This package provides utility functions and classes that make it easier to work with the COI. They encapsulate common use cases so that authors of optimization problems don't have to start from scratch. This prevents bugs and saves time.

This repository can be found online on CERN's Gitlab.

Table of Contents

[[TOC]]

Motivation

These utilities have been extracted from the COI so that they can evolve independently. This makes it possible to evolve them gradually as necessary while keeping the COI themselves stable.

The utilities are separated by the third-party packages that they enhance. This makes it possible to depend only on utilities only for the packages one is interested in, without installing any irrelevant ones.

Utilities should be simple, self-contained, and based on actual usage. Merge requests and feature suggestions are both welcome!

Installation

In your project that already uses CernML-COI, go to setup.cfg or setup.py and add a dependency on cernml-coi-utils. Add the utilities that you're interested in as extras. Each extra is named after the third-party package that it depends on. You may also use the extra all to use all utilities.

# setup.cfg
[options]
install_requires =
    cernml-coi-utils[pyjapc,matplotlib] ~= 0.2.5

Examples

This section provides a minimal showcase. See the documentation for a more thorough introduction.

A PyJapc wrapper that facilities subscription handling:

from pyjapc import PyJapc
from cernml import japc_utils

japc = PyJapc("SPS.USER.ALL")
stream = japc_utils.subscribe_stream(japc, "SOME.MONITOR/Acquisition")
with stream:
    while True:
        data, header = stream.pop_or_wait()
        print(header.cycle_stamp, "--", data)

A PJLSA wrapper that facilitates function incorporations:

from pjlsa import LSAClient

lsa = LSAClient(server="NEXT")
with lsa.java_api():
    from cernml import lsa_utils

    incorporator = lsa_utils.Incorporator("MAGNET/K", user="SPS.USER.MD1")
    incorporator.incorporate_and_trim(
        cycle_time=300.0,
        value=1e-3,
        relative=True,
        description="Automatic trim from Python",
    )

A Gym space wrapper to automatically normalize parameters:

import numpy
from gymnasium import spaces
from cernml import gym_utils

space = spaces.Dict({
    "positions": spaces.Box(-30.0, 30.0, shape=(2,)),
    "angles": spaces.Box(-2.0, 2.0, shape=(2,))
})
unnormalized = dict(positions=[30, 30], angles=[2, 2])

scaler = gym_utils.Scaler(spaces.flatten_space(space))
normalized = scaler.scale(spaces.flatten(space, unnormalized))
assert numpy.array_equal(normalized, [1.0, 1.0, 1.0, 1.0])

roundtrip = spaces.unflatten(space, scaler.unscale(normalized))
assert roundtrip == unnormalized

Simplifying rendering in a Gym environment:

import time
import numpy
from cernml import mpl_utils
from matplotlib import pyplot

points = []
def iter_updates(figure):
    axes = figure.subplot(111)
    [line] = axes.plot(points)
    while True:
        yield
        indices = numpy.arange(len(points))
        line.set_data(indices, points)
        axes.update_datalim()
        axes.autoscale_view()

renderer = mpl_utils.make_renderer(iter_updates)
renderer.update("human")
for _ in range(20):
    pyplot.pause(0.5)
    points.append(numpy.random.uniform())
    renderer.update("human")

Stability

This package uses a variant of Semantic Versioning that makes additional promises during the initial development (major version 0): whenever breaking changes to the public API are published, the first non-zero version number will increase. This means that code that uses COI version 0.2.7 will continue to work with version 0.2.8, but may break with version 0.3.0.

The exception to this are the contents of cernml.coi.unstable, which may change in any given release.

Changelog

See here.

Documentation

Documentation is provided by the Acc-Py documentation server, which is only available inside the CERN network. Additionally, the API is thoroughly documented with Python docstrings.

License

Except as otherwise noted, this work is licensed under either of GNU Public License, Version 3.0 or later, or European Union Public License, Version 1.2 or later, at your option. See COPYING for details.

Unless You explicitly state otherwise, any contribution intentionally submitted by You for inclusion in this Work (the Covered Work) shall be dual-licensed as above, without any additional terms or conditions.

For full authorship information, see the version control history.