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Citation verification tool: existence, URL liveness, and content relevance checks

Project description

CiteSentry

PyPI Python CI

Citation verification tool: check whether references actually exist, whether their URLs are live, and whether the content is relevant to the citation.

What it does

Three checks per reference:

  1. Existence — resolves against OpenAlex, Crossref, Semantic Scholar, arXiv, and domain-specific databases (PubMed for biomedical, DBLP for CS)
  2. URL liveness — HTTP HEAD/GET check; classifies 2xx/4xx/timeout/bot-protection
  3. Content relevance — LLM-backed check comparing fetched content to the cited title/topic (requires DEEPSEEK_API_KEY for CLI use)

Verdicts: VERIFIED, METADATA_MISMATCH, DEAD_URL, CONTENT_DRIFT, NOT_FOUND, UNRESOLVABLE.

NOT_FOUND means "could not verify — likely fabricated, needs manual review." Never "fake."

Install

pip install citesentry                 # basic install
pip install "citesentry[cli-llm]"      # + DeepSeek for relevance checks

For development:

git clone https://github.com/mkassaf/CiteSentry
cd CiteSentry
pip install -e ".[dev]"

CLI usage

# Check a BibTeX file
citesentry check refs.bib

# Check a RIS/CSL-JSON/NBIB/plaintext file
citesentry check refs.ris
citesentry check refs.json

# Read from stdin
cat refs.txt | citesentry check -

# Single ad-hoc reference
citesentry check-one "Vaswani et al. (2017). Attention is all you need. NeurIPS."

# Output formats: table (default), json, md
citesentry check refs.bib --format json
citesentry check refs.bib --format md > report.md

# Skip checks
citesentry check refs.bib --no-llm       # skip relevance (no API key needed)
citesentry check refs.bib --no-url       # skip URL liveness

# Domain adapters (auto by default)
citesentry check refs.bib --domain pubmed   # force PubMed only
citesentry check refs.bib --domain none     # disable domain adapters

# Override plaintext style detection
citesentry check refs.txt --style ieee

Exit code is non-zero if any reference is NOT_FOUND or DEAD_URL (useful in CI).

MCP server (Claude Desktop / Claude Code)

Add to your claude_desktop_config.json:

{
  "mcpServers": {
    "citesentry": {
      "command": "citesentry-mcp",
      "env": {
        "CITESENTRY_MAILTO": "you@example.com",
        "DEEPSEEK_API_KEY": "sk-..."
      }
    }
  }
}

Or with uvx (no prior install needed):

{
  "mcpServers": {
    "citesentry": {
      "command": "uvx",
      "args": ["--from", "citesentry", "citesentry-mcp"],
      "env": { "CITESENTRY_MAILTO": "you@example.com" }
    }
  }
}

MCP tools exposed:

  • verify_reference(reference, check_url, check_relevance) — single reference
  • verify_reference_list(references, format, check_url, check_relevance) — batch
  • check_url_alive(url) — standalone URL check

Claude Code (CLI)

Register the server once:

claude mcp add citesentry \
  -e CITESENTRY_MAILTO=you@example.com \
  -- uvx --from citesentry citesentry-mcp

Then in any Claude Code session, ask naturally:

"Use citesentry to verify this reference: Vaswani et al. (2017). Attention is all you need. NeurIPS."

"Check whether all the references in refs.bib are real."

"Is https://arxiv.org/abs/1706.03762 still live?"

Any MCP-compatible agent (Python example)

import asyncio
from mcp import ClientSession, StdioServerParameters
from mcp.client.stdio import stdio_client

server = StdioServerParameters(
    command="uvx",
    args=["--from", "citesentry", "citesentry-mcp"],
    env={"CITESENTRY_MAILTO": "you@example.com"},
)

async def main():
    async with stdio_client(server) as (read, write):
        async with ClientSession(read, write) as session:
            await session.initialize()

            result = await session.call_tool(
                "verify_reference",
                {"reference": "Vaswani et al. (2017). Attention is all you need. NeurIPS."},
            )
            print(result.content[0].text)

asyncio.run(main())

Environment variables

Variable Default Description
CITESENTRY_MAILTO citesentry@example.com Polite email for OpenAlex/Crossref API
DEEPSEEK_API_KEY Required for relevance checks in CLI
DEEPSEEK_BASE_URL https://api.deepseek.com/v1 OpenAI-compatible endpoint
DEEPSEEK_MODEL deepseek-chat Model for relevance judgments

Supported input formats

  • BibTeX (.bib) — via bibtexparser
  • RIS (.ris) — via rispy; covers Zotero, Mendeley, EndNote, Web of Science
  • CSL JSON (.json) — Zotero exports
  • PubMed NBIB (.nbib)
  • DOI list (.txt with one DOI per line)
  • Plaintext reference sections — IEEE, APA, Vancouver, MLA, Chicago; auto-detected
  • PDF (.pdf) — extracts reference section text via pdfminer.six

Caching

Results are cached in a SQLite database (~/.cache/citesentry/cache.db). Pass --no-cache to bypass.

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