clelandlab-HAL 0.1.0

Heuristic Autonomous Lab

HAL

Heuristic Autonomous Lab

This tool is supposed to be run in Jupyter notebooks using JupyterLab. Examples are available in the examples folder.

Config

Create a config.json with the following content:

{
  "GEMINI_API_KEY": "your gemini API key",
  "MEMORY_DATA_PATH": "/path/to/the/memory/data.gz",
  "EXEC_IMPORT": "import time, os, sys, json, yaml, scipy\nimport numpy as np\nimport matplotlib.pyplot as plt\n"
}

Or pass config dictionary to init function, check examples/mininum.ipynb

Get Started

import HAL
HAL.init() # initialization: loading memory, setting up display, etc.
# HAL.auto = 3 # auto-execution: HAL will automatically execute up to 3 steps

HAL.reset() # this reset HAL session
HAL("Do something") # main interface: query HAL

HAL() # continue without user input

API

# initialization
HAL.init("Name", _config=None)

# main interface
HAL(query=None)

# properties
HAL.auto = 0
HAL.session = {}

# session operations
HAL.reset()
HAL.save(path="session.json")
HAL.load(path="session.json")

# memory operations
HAL.search(query)
HAL.memorize(content, meta={ "source": HAL.name })

# low-level components
HAL.memory   # knowledge base
HAL.display  # UI rendering for JupyterLab
# Components
HAL.gather_document
HAL.sort
HAL.plan
HAL.answer
HAL.code

Directory Structure

• HAL/HAL_answer.py: Answer component
• HAL/HAL_code.py: Develop component (developer)
• HAL/HAL_gather_document.py: Search agent
• HAL/HAL_plan.py: Plan component (planner)
• HAL/HAL_sort.py: Preprocess component
• HAL/__init__.py: Entrypoint and main interface
• HAL/memory.py: Knowledge base implementation
• HAL/display.py: UI rendering for JupyterLab
• HAL/run.py: Execution runtime
• HAL/utils.py: Utility functions

Cite this work

https://arxiv.org/abs/2603.08801

@article{li2026large,
  title={Large Language Model-Assisted Superconducting Qubit Experiments},
  author={Li, Shiheng and Miller, Jacob M and Lee, Phoebe J and Andersson, Gustav and Conner, Christopher R and Joshi, Yash J and Karimi, Bayan and King, Amber M and Malc, Howard L and Mishra, Harsh and others},
  journal={arXiv preprint arXiv:2603.08801},
  year={2026}
}