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GUI for Correlative Light and Electron Microscopy

Project description


PyPI version

GUI for Correlative Light and Electron Microscopy

A graphical program to correlate electron microscopy and fluorescent optical images of the same sample.


The package is pure python, and the easiest way to install it is through PyPi with the following command:

$ pip install clement

We recommend create a separate environment using either conda or virtualenv to manage dependencies.

Further instructions are available in the Wiki here.


A guide with screenshots for semi-automatic alignment of FM and EM images based on observable features is also described on the wiki.

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