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Graph-based corpus engine for annotated text with efficient traversal and search

Project description

Context Fabric

Context-Fabric

A graph-based corpus engine for annotated text with efficient traversal and search.

Overview

Context-Fabric provides a powerful data model for working with annotated text corpora as graphs. It enables efficient navigation, feature lookup, and pattern-based search across large textual datasets.

Forked from Dirk Roorda's Text-Fabric.

Installation

pip install context-fabric

Quick Start

from cfabric.core import Fabric

# Load a dataset
TF = Fabric(locations='path/to/data')
api = TF.load('feature1 feature2')

# Navigate nodes
for node in api.N():
    print(api.F.feature1.v(node))

# Use locality
embedders = api.L.u(node)
embedded = api.L.d(node)

Core API

  • N (Nodes) - Walk through nodes in canonical order
  • F (Features) - Access node feature values
  • E (Edges) - Access edge feature values
  • L (Locality) - Navigate between related nodes
  • T (Text) - Retrieve text representations
  • S (Search) - Search using templates

Performance

Context-Fabric uses memory-mapped numpy arrays for dramatically faster loading and reduced memory consumption compared to Text-Fabric's pickle-based caching.

Benchmarks (BHSA Hebrew Bible corpus — 1.4M nodes, 109 features)

Metric Text-Fabric Context-Fabric Improvement
Load Time 7.0s 2.4s 2.9x faster
Memory Usage 6.1 GB 1.6 GB 74% reduction
Compile Time 7s 91s 13x slower
Cache Size 138 MB 859 MB 6.2x larger

Performance Comparison

The key insight: compilation happens once, loading happens every session. Context-Fabric optimizes for the common case with:

  • Memory-mapped arrays: Data stays on disk, accessed on-demand
  • Efficient sparse iteration: Uses numpy vectorized operations instead of Python loops
  • Cached materialization: Dictionary views computed once per session

Parallel Worker Scaling

Memory-mapped arrays enable efficient parallel processing. Multiple workers share the same mmap'd data instead of each loading a full copy into RAM.

Spawn mode (cold start — each worker loads independently):

Metric Text-Fabric Context-Fabric Savings
Total (4 workers) 9.8 GB 3.3 GB 66% less
Per worker 2.5 GB 821 MB 3x less

Fork mode (API scenario — pre-load then fork workers):

Metric Text-Fabric Context-Fabric Savings
Total (4 workers) 5.8 GB 440 MB 92% less
Per worker 1.5 GB 110 MB 13x less

Measured with USS (Unique Set Size) which correctly excludes shared mmap pages.

Run the benchmark yourself:

python benchmarks/compare_performance.py --source path/to/tf/data --workers 4

Testing

See TESTING.md for how to run tests.

Authors

  • Cody Kingham
  • Dirk Roorda

License

MIT License - see LICENSE for details.

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