It includes functions to read and process cell segmentations, that are made either from automatic or manual segmentations. It also includes a deep-learning based morphology analysis library - for this it uses the convolutional neural network AlexNet for image feature extraction. Finally it contains feature aggregation, dimensionality reduction and visualization, and a module for integrative and joint analysis of morphology and gene expression.
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Release files for convnet-morpho 1.0.1
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| convnet-morpho-1.0.1.tar.gz | 13.8 kB | Without provenance | Details |
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| convnet_morpho-1.0.1-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 34.5 kB
Release files / convnet-morpho-1.0.1.tar.gz
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Release files / convnet_morpho-1.0.1-py3-none-any.whl
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| Size | 20.7 kB |
| Tags | Python 3 |
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